RNA–Protein interactions for RNA: ENSMUST00000001008.5

Ccl3-201, Transcript of C-C motif chemokine 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccl3, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3-201ENSMUST00000001008 Mapk8ip2Q9ERE9 830 aa25.24■■□□□ 1.63
Ccl3-201ENSMUST00000001008 Chic1Q8CBW7 227 aa24.55■■□□□ 1.52
Ccl3-201ENSMUST00000001008 Phf23Q8BSN5 401 aa21.88■■□□□ 1.09
Ccl3-201ENSMUST00000001008 Gm35339A0A140LHH9 1649 aa21.35■■□□□ 1.01
Ccl3-201ENSMUST00000001008 NischQ80TM9 1593 aa21.23■□□□□ 0.99
Ccl3-201ENSMUST00000001008 Abcc9P70170 1546 aa20.63■□□□□ 0.89
Ccl3-201ENSMUST00000001008 Gab3Q8BSM5 595 aa20.62■□□□□ 0.89
Ccl3-201ENSMUST00000001008 Abcc8B2RUS7 1588 aa20.41■□□□□ 0.86
Ccl3-201ENSMUST00000001008 Plppr3Q7TPB0 716 aa20.16■□□□□ 0.82
Ccl3-201ENSMUST00000001008 Senp3Q9EP97 568 aaKnown RBP19.61■□□□□ 0.73
Ccl3-201ENSMUST00000001008 ScribQ80U72 1612 aa19.41■□□□□ 0.7
Ccl3-201ENSMUST00000001008 Fam163aQ8CAA5 168 aa19.23■□□□□ 0.67
Ccl3-201ENSMUST00000001008 Dcaf1Q80TR8 1506 aa18.96■□□□□ 0.63
Ccl3-201ENSMUST00000001008 NacadQ5SWP3 1504 aa18.9■□□□□ 0.62
Ccl3-201ENSMUST00000001008 Kdm5dQ62240 1548 aa18.9■□□□□ 0.62
Ccl3-201ENSMUST00000001008 Rhox8Q6VSS7 320 aa18.72■□□□□ 0.59
Ccl3-201ENSMUST00000001008 Rb1cc1Q9ESK9 1588 aa18.55■□□□□ 0.56
Ccl3-201ENSMUST00000001008 Sycp2Q9CUU3 1500 aa18.49■□□□□ 0.55
Ccl3-201ENSMUST00000001008 Ccdc180J3QNE4 1664 aa18.38■□□□□ 0.53
Ccl3-201ENSMUST00000001008 Baz1aO88379 1555 aa18.33■□□□□ 0.52
Ccl3-201ENSMUST00000001008 Crybg2B7ZCC2 1516 aa18.2■□□□□ 0.5
Ccl3-201ENSMUST00000001008 BicraF8VPZ9 1578 aa18.13■□□□□ 0.49
Ccl3-201ENSMUST00000001008 Zcchc6Q5BLK4 1491 aaKnown RBP17.97■□□□□ 0.47
Ccl3-201ENSMUST00000001008 Rtl1Q7M732 1744 aa17.86■□□□□ 0.45
Ccl3-201ENSMUST00000001008 Smarca2Q6DIC0 1577 aa17.83■□□□□ 0.45
Ccl3-201ENSMUST00000001008 Hoxd11P23813 323 aa17.73■□□□□ 0.43
Ccl3-201ENSMUST00000001008 Pds5bQ4VA53 1446 aaKnown RBP17.6■□□□□ 0.41
Ccl3-201ENSMUST00000001008 Cecr2E9Q2Z1 1453 aa17.56■□□□□ 0.4
Ccl3-201ENSMUST00000001008 ArsiQ32KI9 573 aa17.53■□□□□ 0.4
Ccl3-201ENSMUST00000001008 Smarca4Q3TKT4 1613 aaKnown RBP17.53■□□□□ 0.4
Ccl3-201ENSMUST00000001008 Atad2bE9Q166 1460 aaKnown RBP17.5■□□□□ 0.39
Ccl3-201ENSMUST00000001008 Kcna4Q61423 654 aa17.45■□□□□ 0.38
Ccl3-201ENSMUST00000001008 Ccdc136Q3TVA9 1136 aa17.41■□□□□ 0.38
Ccl3-201ENSMUST00000001008 Brd4Q9ESU6 1400 aaKnown RBP17.38■□□□□ 0.37
Ccl3-201ENSMUST00000001008 Iqgap2Q3UQ44 1575 aa17.36■□□□□ 0.37
Ccl3-201ENSMUST00000001008 Trap1aP19473 224 aa17.32■□□□□ 0.36
Ccl3-201ENSMUST00000001008 GapdhsQ64467 440 aa17.29■□□□□ 0.36
Ccl3-201ENSMUST00000001008 Znf219Q6IQX8 726 aa17.29■□□□□ 0.36
Ccl3-201ENSMUST00000001008 Thoc2B1AZI6 1594 aaKnown RBP17.28■□□□□ 0.36
Ccl3-201ENSMUST00000001008 CftrP26361 1476 aa17.27■□□□□ 0.36
Ccl3-201ENSMUST00000001008 Synj1Q8CHC4 1574 aa17.27■□□□□ 0.35
Ccl3-201ENSMUST00000001008 Cttnbp2B9EJA2 1648 aa17.26■□□□□ 0.35
Ccl3-201ENSMUST00000001008 Ercc6F8VPZ5 1481 aa17.25■□□□□ 0.35
Ccl3-201ENSMUST00000001008 Trim41Q5NCC3 630 aa17.23■□□□□ 0.35
Ccl3-201ENSMUST00000001008 Wdr62Q3U3T8 1523 aa17.16■□□□□ 0.34
Ccl3-201ENSMUST00000001008 Frmpd1A2AKB4 1549 aa17.11■□□□□ 0.33
Ccl3-201ENSMUST00000001008 Slc34a2Q9DBP0 697 aa17.02■□□□□ 0.32
Ccl3-201ENSMUST00000001008 Fam135aQ6NS59 1506 aa16.99■□□□□ 0.31
Ccl3-201ENSMUST00000001008 Cc2d2aQ8CFW7 1633 aa16.99■□□□□ 0.31
Ccl3-201ENSMUST00000001008 Esf1Q3V1V3 845 aaKnown RBP16.96■□□□□ 0.31
Ccl3-201ENSMUST00000001008 Dnajc5bQ9CQ94 199 aa16.94■□□□□ 0.3
Ccl3-201ENSMUST00000001008 Phldb1Q6PDH0 1371 aaKnown RBP16.93■□□□□ 0.3
Ccl3-201ENSMUST00000001008 Golga3P55937 1487 aa16.91■□□□□ 0.3
Ccl3-201ENSMUST00000001008 Baz1bQ9Z277 1479 aa16.86■□□□□ 0.29
Ccl3-201ENSMUST00000001008 Unc13aQ4KUS2 1712 aa16.83■□□□□ 0.28
Ccl3-201ENSMUST00000001008 Top2bQ64511 1612 aa16.81■□□□□ 0.28
Ccl3-201ENSMUST00000001008 Cngb1E1AZ71 1325 aa16.78■□□□□ 0.28
Ccl3-201ENSMUST00000001008 Rsf1E9PWW9 1441 aaKnown RBP16.73■□□□□ 0.27
Ccl3-201ENSMUST00000001008 Ubl4bQ9CQ84 188 aa16.71■□□□□ 0.27
Ccl3-201ENSMUST00000001008 Lamc3Q9R0B6 1581 aa16.68■□□□□ 0.26
Ccl3-201ENSMUST00000001008 Kif15Q6P9L6 1387 aa16.64■□□□□ 0.26
Ccl3-201ENSMUST00000001008 Fmn1Q05860 1466 aa16.64■□□□□ 0.25
Ccl3-201ENSMUST00000001008 TnnQ80Z71 1560 aa16.63■□□□□ 0.25
Ccl3-201ENSMUST00000001008 HrcG5E8J6 738 aa16.58■□□□□ 0.24
Ccl3-201ENSMUST00000001008 Chrna2Q91X60 512 aa16.58■□□□□ 0.24
Ccl3-201ENSMUST00000001008 Mrc2Q64449 1479 aa16.58■□□□□ 0.24
Ccl3-201ENSMUST00000001008 Rsph4aQ8BYM7 716 aa16.55■□□□□ 0.24
Ccl3-201ENSMUST00000001008 Cux2P70298 1426 aa16.53■□□□□ 0.24
Ccl3-201ENSMUST00000001008 Ccdc88bQ4QRL3 1481 aa16.51■□□□□ 0.23
Ccl3-201ENSMUST00000001008 Ccdc18Q640L5 1455 aa16.45■□□□□ 0.22
Ccl3-201ENSMUST00000001008 Camsap1A2AHC3 1581 aa16.43■□□□□ 0.22
Ccl3-201ENSMUST00000001008 Akt1s1Q9D1F4 257 aa16.43■□□□□ 0.22
Ccl3-201ENSMUST00000001008 Cep164Q5DU05 1446 aa16.41■□□□□ 0.22
Ccl3-201ENSMUST00000001008 Top2aQ01320 1528 aaKnown RBP16.4■□□□□ 0.22
Ccl3-201ENSMUST00000001008 Npm1Q61937 292 aaKnown RBP16.38■□□□□ 0.21
Ccl3-201ENSMUST00000001008 Rimbp2Q80U40 1072 aa16.35■□□□□ 0.21
Ccl3-201ENSMUST00000001008 Il27Q8K3I6 234 aa16.31■□□□□ 0.2
Ccl3-201ENSMUST00000001008 Kif21aQ9QXL2 1672 aa16.3■□□□□ 0.2
Ccl3-201ENSMUST00000001008 LrpprcQ6PB66 1392 aaKnown RBP16.27■□□□□ 0.2
Ccl3-201ENSMUST00000001008 Grin2bQ01097 1482 aa16.25■□□□□ 0.19
Ccl3-201ENSMUST00000001008 Dhx29Q6PGC1 1365 aaKnown RBP16.23■□□□□ 0.19
Ccl3-201ENSMUST00000001008 PogzQ8BZH4 1409 aaKnown RBP16.22■□□□□ 0.19
Ccl3-201ENSMUST00000001008 NrkQ9R0G8 1455 aa16.18■□□□□ 0.18
Ccl3-201ENSMUST00000001008 Crocc2F6XLV1 1638 aa16.16■□□□□ 0.18
Ccl3-201ENSMUST00000001008 Lrriq1Q0P5X1 1673 aa16.15■□□□□ 0.18
Ccl3-201ENSMUST00000001008 Duox2A2AQ99 1517 aa16.14■□□□□ 0.17
Ccl3-201ENSMUST00000001008 Shroom4Q1W617 1475 aa16.13■□□□□ 0.17
Ccl3-201ENSMUST00000001008 Efcab5A0JP43 1406 aa16.11■□□□□ 0.17
Ccl3-201ENSMUST00000001008 Plb1Q3TTY0 1478 aa16.08■□□□□ 0.16
Ccl3-201ENSMUST00000001008 Urb2E9Q7L1 1524 aaKnown RBP16.08■□□□□ 0.16
Ccl3-201ENSMUST00000001008 PtprkP35822 1457 aa16.07■□□□□ 0.16
Ccl3-201ENSMUST00000001008 Rapgef2Q8CHG7 1496 aa16.06■□□□□ 0.16
Ccl3-201ENSMUST00000001008 Samd9lQ69Z37 1561 aa16.02■□□□□ 0.16
Ccl3-201ENSMUST00000001008 Ift140E9PY46 1464 aa16■□□□□ 0.15
Ccl3-201ENSMUST00000001008 Npm2Q80W85 207 aa16■□□□□ 0.15
Ccl3-201ENSMUST00000001008 Eif4g3Q80XI3 1579 aaKnown RBP15.97■□□□□ 0.15
Ccl3-201ENSMUST00000001008 Cep162Q6ZQ06 1403 aa15.94■□□□□ 0.14
Ccl3-201ENSMUST00000001008 Map3k1P53349 1493 aa15.92■□□□□ 0.14
Ccl3-201ENSMUST00000001008 Eif4g1Q6NZJ6 1600 aaKnown RBP15.92■□□□□ 0.14
Ccl3-201ENSMUST00000001008 Disp1Q3TDN0 1521 aa15.92■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms