RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 DNMT3AQ9Y6K1 912 aaPredicted RBP16.02■□□□□ 0.15
PHGDH-216ENST00000641375 NUMA1Q14980 2115 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 NRP2O60462 931 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 RPSAP08865 295 aaKnown RBP16.01■□□□□ 0.15
PHGDH-216ENST00000641375 DIO3P55073 304 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 MTTPP55157 894 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 RPA4Q13156 261 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 INPP5AQ14642 412 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 NR6A1Q15406 480 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 SMU1Q2TAY7 513 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 MAP7D1Q3KQU3 841 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 FBXO43Q4G163 708 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 TRIM46Q7Z4K8 759 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 C11orf96Q7Z7L8 435 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 KBTBD6Q86V97 674 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 LRRTM4Q86VH4 590 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 OR9I1Q8NGQ6 314 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 TSPEARQ8WU66 669 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 STMN2Q93045 179 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 MSANTD3Q96H12 275 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 NPAS2Q99743 824 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 ATG10Q9H0Y0 220 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 WDR41Q9HAD4 459 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 RNPEPL1Q9HAU8 725 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 STOX2Q9P2F5 926 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-216ENST00000641375 FZD4Q9ULV1 537 aa16.01■□□□□ 0.15
PHGDH-216ENST00000641375 DOCK9Q9BZ29 2069 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 FFAR3O14843 346 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 LSM1O15116 133 aaKnown RBP16■□□□□ 0.15
PHGDH-216ENST00000641375 GPR42O15529 346 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 MBTPS2O43462 519 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 UGDHO60701 494 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 C1orf105O95561 183 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 PAK4O96013 591 aaPredicted RBP16■□□□□ 0.15
PHGDH-216ENST00000641375 PFN3P60673 137 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 EMX2Q04743 252 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 MAD2L1Q13257 205 aaPredicted RBP16■□□□□ 0.15
PHGDH-216ENST00000641375 IRF4Q15306 451 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 PDCD4Q53EL6 469 aaKnown RBP16■□□□□ 0.15
PHGDH-216ENST00000641375 CAPRIN2Q6IMN6 1127 aaKnown RBP16■□□□□ 0.15
PHGDH-216ENST00000641375 NEK5Q6P3R8 708 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 DOK6Q6PKX4 331 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 AGTRAPQ6RW13 159 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 BNC2Q6ZN30 1099 aaPredicted RBP16■□□□□ 0.15
PHGDH-216ENST00000641375 USP30Q70CQ3 517 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 AMZ2Q86W34 360 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 FUNDC1Q8IVP5 155 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 SFRP1Q8N474 314 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 L3MBTL4Q8NA19 623 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 PCYOX1LQ8NBM8 494 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 USP7Q93009 1102 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 SIPA1Q96FS4 1042 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 PREBQ9HCU5 417 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 PHPT1Q9NRX4 125 aaPredicted RBP16■□□□□ 0.15
PHGDH-216ENST00000641375 ZNF490Q9ULM2 529 aaPredicted RBP16■□□□□ 0.15
PHGDH-216ENST00000641375 SNX6Q9UNH7 406 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 NCKAP1Q9Y2A7 1128 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 C15orf41Q9Y2V0 281 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 MANBAO00462 879 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 SMNDC1O75940 238 aaKnown RBP eCLIP16■□□□□ 0.15
PHGDH-216ENST00000641375 C7P10643 843 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 COL9A1P20849 921 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 BDKRB1P46663 353 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 RPS6KA3P51812 740 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 ADPRHP54922 357 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 ACTR3P61158 418 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 TMEM259Q4ZIN3 620 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 REP15Q6BDI9 236 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 KLHDC8AQ8IYD2 350 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 TP53I13Q8NBR0 393 aaPredicted RBP16■□□□□ 0.15
PHGDH-216ENST00000641375 LGR4Q9BXB1 951 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 SLC17A9Q9BYT1 436 aa16■□□□□ 0.15
PHGDH-216ENST00000641375 MBNL1Q9NR56 388 aaKnown RBP16■□□□□ 0.15
PHGDH-216ENST00000641375 NOP53Q9NZM5 478 aaKnown RBP16■□□□□ 0.15
PHGDH-216ENST00000641375 A0A1W2PQU0 124 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 SLC16A8O95907 504 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 ITPKAP23677 461 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 LRP8Q14114 963 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 NFE2L1Q14494 772 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 CPSF6Q16630 551 aaKnown RBP eCLIP15.99■□□□□ 0.15
PHGDH-216ENST00000641375 IMPG1Q17R60 797 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 AP5B1Q2VPB7 878 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 EOGTQ5NDL2 527 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 LIPJQ5W064 366 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 HACD2Q6Y1H2 254 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 RIPOR1Q6ZS17 1223 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 THOC6Q86W42 341 aaKnown RBP15.99■□□□□ 0.15
PHGDH-216ENST00000641375 ENDOVQ8N8Q3 282 aaKnown RBP15.99■□□□□ 0.15
PHGDH-216ENST00000641375 ROPN1LQ96C74 230 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 HBEGFQ99075 208 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 PKP4Q99569 1192 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 PHF7Q9BWX1 381 aaPredicted RBP15.99■□□□□ 0.15
PHGDH-216ENST00000641375 ZIM2Q9NZV7 527 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 NDUFAF1Q9Y375 327 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 CCL27Q9Y4X3 112 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 TBC1D3DA0A087WVF3 549 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 TBC1D3IA0A087WXS9 549 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 TBC1D3EA0A087X179 549 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 TBC1D3KA0A087X1G2 549 aa15.99■□□□□ 0.15
PHGDH-216ENST00000641375 TBC1D3FA6NER0 549 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms