RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 SLC22A15Q8IZD6 547 aa13.87□□□□□ -0.19
MBD1-220ENST00000589758 CAPZA3Q96KX2 299 aa13.87□□□□□ -0.19
MBD1-220ENST00000589758 ZNF778Q96MU6 729 aa13.87□□□□□ -0.19
MBD1-220ENST00000589758 NAPGQ99747 312 aaPredicted RBP13.87□□□□□ -0.19
MBD1-220ENST00000589758 MLXIPLQ9NP71 852 aa13.87□□□□□ -0.19
MBD1-220ENST00000589758 EIF2B3Q9NR50 452 aaKnown RBP13.87□□□□□ -0.19
MBD1-220ENST00000589758 HOMER3Q9NSC5 361 aa13.87□□□□□ -0.19
MBD1-220ENST00000589758 DRG1Q9Y295 367 aaKnown RBP13.87□□□□□ -0.19
MBD1-220ENST00000589758 PCDHGB7Q9Y5F8 929 aa13.87□□□□□ -0.19
MBD1-220ENST00000589758 MAST4O15021 2626 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 ISM1B1AKI9 464 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 GPC4O75487 556 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 TMEM63AO94886 807 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 APOA4P06727 396 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 TPBGLP0DKB5 382 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 TCP1P17987 556 aaKnown RBP13.86□□□□□ -0.19
MBD1-220ENST00000589758 CCR7P32248 378 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 RPL22P35268 128 aaKnown RBP13.86□□□□□ -0.19
MBD1-220ENST00000589758 PTGIRP43119 386 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 TTPAP49638 278 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 TERF1P54274 439 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 HSPA14Q0VDF9 509 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 NCF4Q15080 339 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 TRIP13Q15645 432 aaPredicted RBP13.86□□□□□ -0.19
MBD1-220ENST00000589758 SLC5A12Q1EHB4 618 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 PTCHD3Q3KNS1 767 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 PCID2Q5JVF3 399 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 COLEC12Q5KU26 742 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 PAPD7Q5XG87 772 aaKnown RBP13.86□□□□□ -0.19
MBD1-220ENST00000589758 CPZQ66K79 652 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 FAM198BQ6UWH4 519 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 NAPRTQ6XQN6 538 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 MED25Q71SY5 747 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 ATCAYQ86WG3 371 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 RAB43Q86YS6 212 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 HPS6Q86YV9 775 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 TMEM102Q8N9M5 508 aaPredicted RBP13.86□□□□□ -0.19
MBD1-220ENST00000589758 FLVCR1-AS1Q8TAF5 88 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 MAGOHBQ96A72 148 aaKnown RBP13.86□□□□□ -0.19
MBD1-220ENST00000589758 MIB2Q96AX9 1013 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 SLC22A18Q96BI1 424 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 NAP1L3Q99457 506 aaPredicted RBP13.86□□□□□ -0.19
MBD1-220ENST00000589758 FAM60AQ9NP50 221 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 CATSPERZQ9NTU4 200 aa13.86□□□□□ -0.19
MBD1-220ENST00000589758 CTAGE9A4FU28 777 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 PRMT5O14744 637 aaPredicted RBP13.85□□□□□ -0.19
MBD1-220ENST00000589758 KPNA5O15131 536 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 PDGFAP04085 211 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 GABRA4P48169 554 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 CD97P48960 835 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 NPY2RP49146 381 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 VPS41P49754 854 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 RAB28P51157 221 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 RRADP55042 308 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 CSE1LP55060 971 aaKnown RBP13.85□□□□□ -0.19
MBD1-220ENST00000589758 CHAF1BQ13112 559 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 SEMA3AQ14563 771 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 TMED2Q15363 201 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 KYNUQ16719 465 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 ZNF385CQ66K41 422 aaPredicted RBP13.85□□□□□ -0.19
MBD1-220ENST00000589758 RHBDD2Q6NTF9 364 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 TTC27Q6P3X3 843 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 TLDC1Q6P9B6 456 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 UNC5DQ6UXZ4 953 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 TRIM73Q86UV7 250 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 PROKR1Q8TCW9 393 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 ACTRT1Q8TDG2 376 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 IP6K3Q96PC2 410 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 PANX3Q96QZ0 392 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 IL22Q9GZX6 179 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 CHRAC1Q9NRG0 131 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 SPHK1Q9NYA1 384 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 GPN3Q9UHW5 284 aaPredicted RBP13.85□□□□□ -0.19
MBD1-220ENST00000589758 TTC7AQ9ULT0 858 aaPredicted RBP13.85□□□□□ -0.19
MBD1-220ENST00000589758 SRPK3Q9UPE1 567 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 CDYLQ9Y232 598 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 ZNF451Q9Y4E5 1061 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 MRFAP1Q9Y605 127 aa13.85□□□□□ -0.19
MBD1-220ENST00000589758 SPTBP11277 2137 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 H3BMH7 237 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 CES2O00748 559 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 CD3EAPO15446 510 aaKnown RBP13.84□□□□□ -0.19
MBD1-220ENST00000589758 ZSCAN9O15535 394 aaPredicted RBP13.84□□□□□ -0.19
MBD1-220ENST00000589758 CEACAM4O75871 244 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 SLCO2B1O94956 709 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 S1PR4O95977 384 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 CD9P21926 228 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 AOAHP28039 575 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 PKLRP30613 574 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 MLLT10P55197 1068 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 BASP1P80723 227 aaKnown RBP13.84□□□□□ -0.19
MBD1-220ENST00000589758 DCDP81605 110 aaKnown RBP13.84□□□□□ -0.19
MBD1-220ENST00000589758 UBAP2LQ14157 1087 aaKnown RBP13.84□□□□□ -0.19
MBD1-220ENST00000589758 SSPNQ14714 243 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 ZIC1Q15915 447 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 MLIPQ5VWP3 458 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 PTRHD1Q6GMV3 140 aaKnown RBP13.84□□□□□ -0.19
MBD1-220ENST00000589758 TTC23LQ6PF05 361 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 LRRC6Q86X45 466 aa13.84□□□□□ -0.19
MBD1-220ENST00000589758 DCUN1D3Q8IWE4 304 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms