RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ACTR10Q9NZ32 417 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 TXNDC16Q9P2K2 825 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 KLHL3Q9UH77 587 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 LNPEPQ9UIQ6 1025 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 SLC39A10Q9ULF5 831 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 ICKQ9UPZ9 632 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 TDRKHQ9Y2W6 561 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 CHD8Q9HCK8 2581 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 SPEGQ15772 3267 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 MAP1BP46821 2468 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 GSAPA4D1B5 854 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 A8MU76 341 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 C9orf172C9J069 976 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 BTN3A1O00481 513 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 SLC16A5O15375 505 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 ZBTB14O43829 449 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 HAUS5O94927 633 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 C8GP07360 202 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 CHRM5P08912 532 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 FGF5P12034 268 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 HGFP14210 728 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 POLR2CP19387 275 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 MPSTP25325 297 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 MAP4P27816 1152 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 PRDX3P30048 256 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 KPNA2P52292 529 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 CSE1LP55060 971 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 PRKG2Q13237 762 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 PDAP1Q13442 181 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 CUL1Q13616 776 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 KLHL38Q2WGJ6 581 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 TRMT10BQ6PF06 316 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 CNSTQ6PJW8 725 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 SPESP1Q6UW49 350 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 FAM92BQ6ZTR7 304 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 PPP1R3BQ86XI6 285 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 VRK3Q8IV63 474 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 IFT81Q8WYA0 676 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 ANKRD7Q92527 254 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 VPS39Q96JC1 886 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 GPR21Q99679 349 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 MAP3K3Q99759 626 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 CPNE1Q99829 537 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 RHOJQ9H4E5 214 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 OCIAD1Q9NX40 245 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 SLC17A6Q9P2U8 582 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 SSUH2Q9Y2M2 353 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 RAXQ9Y2V3 346 aa13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 TMEM184BQ9Y519 407 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-202ENST00000585540 IGF2RP11717 2491 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 URB1O60287 2271 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 A0A0J9YY10 115 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 PABPN1LA6NDY0 278 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 MYO1CO00159 1063 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 TAF4O00268 1085 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 BTN3A3O00478 584 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 PRAMEF10O60809 474 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 AHSGP02765 367 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 ERGP11308 486 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 CCL4P13236 92 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 CYP2A7P20853 494 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 PHBP35232 272 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 ETV5P41161 510 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 TUBB4BP68371 445 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 ABRQ12979 859 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 ZNF789Q5FWF6 425 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 ZNF549Q6P9A3 640 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 DTX1Q86Y01 620 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 MYO1HQ8N1T3 1032 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 TCTN2Q96GX1 697 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 MENTQ9BUN1 341 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 SOHLH2Q9NX45 425 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 UTP6Q9NYH9 597 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 ANKMY1Q9P2S6 941 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 RARRES3Q9UL19 164 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 MED16Q9Y2X0 877 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 VWA7Q9Y334 891 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 BPTFQ12830 3046 aa13.37□□□□□ -0.27
PRKCSH-202ENST00000585540 IGHV5-51A0A0C4DH38 117 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 CCNDBP1O95273 360 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 ENO2P09104 434 aaPredicted RBP13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 FDXRP22570 491 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 OAS2P29728 719 aaKnown RBP13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 SSTR1P30872 391 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 GP5P40197 560 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 MAGEA4P43358 317 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 SEPHS1P49903 392 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 TMPRSS3P57727 454 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 FOXM1Q08050 763 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 TUBB3Q13509 450 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 CYP2A13Q16696 494 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 ACSBG2Q5FVE4 666 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 NAPRTQ6XQN6 538 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 C3orf62Q6ZUJ4 267 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 CCDC91Q7Z6B0 441 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 SPACA3Q8IXA5 215 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 NKAPQ8N5F7 415 aaKnown RBP13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 ESX1Q8N693 406 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 OR9A1PQ8NGU1 263 aa13.36□□□□□ -0.27
PRKCSH-202ENST00000585540 CFAP61Q8NHU2 1237 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms