RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 NACC2Q96BF6 587 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 HAUS1Q96CS2 278 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 FAF2Q96CS3 445 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 PERPQ96FX8 193 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 PIWIL1Q96J94 861 aaKnown RBP7.07□□□□□ -1.28
CNOT1-222ENST00000570139 KRT12Q99456 494 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 FERMT1Q9BQL6 677 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 CLSTN3Q9BQT9 956 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 ALG8Q9BVK2 526 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 ZBP1Q9H171 429 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 ANKZF1Q9H8Y5 726 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 SAP30LQ9HAJ7 183 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 CD320Q9NPF0 282 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 FAM114A2Q9NRY5 505 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 DONSONQ9NYP3 566 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 UXTQ9UBK9 157 aaPredicted RBP7.07□□□□□ -1.28
CNOT1-222ENST00000570139 MGAT4CQ9UBM8 478 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 ASB3Q9Y575 518 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 GREB1Q4ZG55 1949 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 FAM237BA0A1B0GVD1 139 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 WDR27A2RRH5 827 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 UBE2CO00762 179 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 ATP8B1O43520 1251 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 FGF19O95750 216 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 IGLV3-25P01717 112 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 IL6RP08887 468 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-222ENST00000570139 OR4Q2P0C623 313 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 RARGP13631 454 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 H2AFXP16104 143 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-222ENST00000570139 ZNF8P17098 575 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-222ENST00000570139 PRPH2P23942 346 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 EEF1DP29692 281 aaKnown RBP7.06□□□□□ -1.28
CNOT1-222ENST00000570139 OAS2P29728 719 aaKnown RBP7.06□□□□□ -1.28
CNOT1-222ENST00000570139 CCR1P32246 355 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 SLC8A1P32418 973 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 OR1D2P34982 312 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 PBX3P40426 434 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 GARSP41250 739 aaKnown RBP7.06□□□□□ -1.28
CNOT1-222ENST00000570139 MTNR1AP48039 350 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 HCAR3P49019 387 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 ARSEP51690 589 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 CLCN2P51788 898 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 CACNA2D1P54289 1103 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 CDH6P55285 790 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 CAV1Q03135 178 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 SCARB2Q14108 478 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 DPYSL3Q14195 570 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 CCDC142Q17RM4 750 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 SH2D4BQ5SQS7 431 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 TRNP1Q6NT89 227 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 SCYL2Q6P3W7 929 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 EMBQ6PCB8 327 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 MFSD7Q6UXD7 560 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 C4orf22Q6V702 233 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 BHLHA9Q7RTU4 235 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 VPS52Q8N1B4 723 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 ARFGAP1Q8N6T3 406 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 PRELID2Q8N945 189 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 TMEM116Q8NCL8 245 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 C11orf65Q8NCR3 313 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 BBOF1Q8ND07 529 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 STKLD1Q8NE28 680 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 HSPH1Q92598 858 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 FBXO32Q969P5 355 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 MAGOHBQ96A72 148 aaKnown RBP7.06□□□□□ -1.28
CNOT1-222ENST00000570139 KLHL15Q96M94 604 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 CMTM3Q96MX0 182 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 PRR25Q96S07 402 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 SEPT5Q99719 369 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-222ENST00000570139 SNRNP25Q9BV90 132 aaKnown RBP7.06□□□□□ -1.28
CNOT1-222ENST00000570139 ELOVL1Q9BW60 279 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 CALN1Q9BXU9 219 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 TEX101Q9BY14 249 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 TSPYL1Q9H0U9 437 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 RETREG1Q9H6L5 497 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 TMEM30AQ9NV96 361 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 PCSK1NQ9UHG2 260 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 FZD10Q9ULW2 581 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 FAM169AQ9Y6X4 670 aa7.06□□□□□ -1.28
CNOT1-222ENST00000570139 PLXNA4Q9HCM2 1894 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 MCF2LO15068 1137 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 MUSKO15146 869 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 APOEP02649 317 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 FYNP06241 537 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 RHOXF2BP0C7M4 288 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 ZDHHC11BP0C7U3 371 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 LINC00271P0C7V0 271 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 LYL1P12980 280 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 AVPR2P30518 371 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 TTKP33981 857 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 CTNNB1P35222 781 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 SERPINB6P35237 376 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 BMPR1AP36894 532 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 COILP38432 576 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-222ENST00000570139 CXCR3P49682 368 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 ARPP19P56211 112 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 XRCC4Q13426 336 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 SIX1Q15475 284 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-222ENST00000570139 NTRK2Q16620 822 aa7.05□□□□□ -1.28
CNOT1-222ENST00000570139 GSTA3Q16772 222 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms