RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 TCTN2Q96GX1 697 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 PBKQ96KB5 322 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 PPM1MQ96MI6 270 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 TRAPPC9Q96Q05 1148 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 PANX3Q96QZ0 392 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 OR2A14Q96R47 310 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 NAP1L3Q99457 506 aaPredicted RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 DPH2Q9BQC3 489 aaPredicted RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 KIFC1Q9BW19 673 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 AP1M1Q9BXS5 423 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 SLC7A5P2Q9GIP4 190 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 TWSG1Q9GZX9 223 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 P2RY12Q9H244 342 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 ACTL8Q9H568 366 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 XKR8Q9H6D3 395 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 MRM3Q9HC36 420 aaKnown RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 SYBUQ9NX95 663 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 MARCH4Q9P2E8 410 aaPredicted RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 GNPTGQ9UJJ9 305 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 SERTAD3Q9UJW9 196 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 TTC7AQ9ULT0 858 aaPredicted RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 SOX13Q9UN79 622 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 CDYLQ9Y232 598 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 TDRKHQ9Y2W6 561 aaKnown RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 KCNMB2Q9Y691 235 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 TNRC6AQ8NDV7 1962 aaKnown RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 ANKRD12Q6UB98 2062 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 TCRBV7S3A2A0A539 114 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 CDC14CA4D256 554 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 IQCF5A8MTL0 148 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 ISM1B1AKI9 464 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 E7EQ34 232 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 H3BMM5 538 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 MKRN2OSH3BPM6 223 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 MEN1O00255 615 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 PGRMC1O00264 195 aaKnown RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 CES2O00748 559 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 ST8SIA5O15466 376 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 ZNF749O43361 778 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 NDUFS3O75489 264 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 RFPL1O75677 317 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 VAPBO95292 243 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 ESR1P03372 595 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 HBQ1P09105 142 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 TPBGLP0DKB5 382 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 MLNP12872 115 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 PVRP15151 417 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 UGT2B7P16662 529 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 PAMP19021 973 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 AGXTP21549 392 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 RPS3P23396 243 aaKnown RBP eCLIP4.62□□□□□ -1.671e-6■■□□□ 12.2
CLK3-219ENST00000567805 ARNTP27540 789 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 PKLRP30613 574 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 RORAP35398 523 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 VPS41P49754 854 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 CSRP3P50461 194 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 RAB28P51157 221 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 PMS2P54278 862 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 CSE1LP55060 971 aaKnown RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 ADARP55265 1226 aaKnown RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 RPS18P62269 152 aaKnown RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 NFKB2Q00653 900 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 GPS1Q13098 491 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 TRIP13Q15645 432 aaPredicted RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 CYP1B1Q16678 543 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 KYNUQ16719 465 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 UGT8Q16880 541 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 SLC5A12Q1EHB4 618 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 TYSND1Q2T9J0 566 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 LACTB2Q53H82 288 aaPredicted RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 ZNF789Q5FWF6 425 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 PLEKHS1Q5SXH7 462 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 KIAA0930Q6ICG6 404 aaPredicted RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 FAM199XQ6PEV8 388 aaPredicted RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 TTC23LQ6PF05 361 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 CCDC137Q6PK04 289 aaKnown RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 CDHR3Q6ZTQ4 885 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 OTOAQ7RTW8 1153 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 SDCCAG8Q86SQ7 713 aaPredicted RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 LDB1Q86U70 411 aaPredicted RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 VRK3Q8IV63 474 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 APLFQ8IW19 511 aaPredicted RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 DCUN1D3Q8IWE4 304 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 SYTL1Q8IYJ3 562 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 KRT222Q8N1A0 295 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 RAB42Q8N4Z0 105 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 OTUD6BQ8N6M0 293 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 C19orf47Q8N9M1 422 aaKnown RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 MCUQ8NE86 351 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 OR1L3Q8NH93 324 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 FLVCR1-AS1Q8TAF5 88 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 LKAAEAR1Q8TD35 194 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 GRK7Q8WTQ7 553 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 N4BP2L2Q92802 583 aaPredicted RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 MAGOHBQ96A72 148 aaKnown RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 SLC22A18Q96BI1 424 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 MFSD3Q96ES6 412 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 ABHD17AQ96GS6 310 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 MS4A14Q96JA4 679 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 TCF12Q99081 682 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms