RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 PTCHD3Q3KNS1 767 aa19.18■□□□□ 0.66
CLN6-206ENST00000565471 LDB1Q86U70 411 aaPredicted RBP19.18■□□□□ 0.66
CLN6-206ENST00000565471 LRRC6Q86X45 466 aa19.18■□□□□ 0.66
CLN6-206ENST00000565471 DCUN1D3Q8IWE4 304 aa19.18■□□□□ 0.66
CLN6-206ENST00000565471 TEX19Q8NA77 164 aa19.18■□□□□ 0.66
CLN6-206ENST00000565471 PANX3Q96QZ0 392 aa19.18■□□□□ 0.66
CLN6-206ENST00000565471 C17orf62Q9BQA9 187 aa19.18■□□□□ 0.66
CLN6-206ENST00000565471 DHRS4Q9BTZ2 278 aa19.18■□□□□ 0.66
CLN6-206ENST00000565471 MENTQ9BUN1 341 aa19.18■□□□□ 0.66
CLN6-206ENST00000565471 P2RY12Q9H244 342 aa19.18■□□□□ 0.66
CLN6-206ENST00000565471 MRM3Q9HC36 420 aaKnown RBP19.18■□□□□ 0.66
CLN6-206ENST00000565471 PLAGL1Q9UM63 463 aa19.18■□□□□ 0.66
CLN6-206ENST00000565471 PCDHGA9Q9Y5G4 932 aaKnown RBP19.18■□□□□ 0.66
CLN6-206ENST00000565471 ARGFXA6NJG6 315 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 IQCF5A8MTL0 148 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 ISM1B1AKI9 464 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 C9J4A7 227 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 TPSB2P20231 275 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 RPS3P23396 243 aaKnown RBP eCLIP19.17■□□□□ 0.66
CLN6-206ENST00000565471 PEBP1P30086 187 aaKnown RBP19.17■□□□□ 0.66
CLN6-206ENST00000565471 PTGIRP43119 386 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 CRADDP78560 199 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 TPSAB1Q15661 275 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 CPZQ66K79 652 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 RHBDD2Q6NTF9 364 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 PROKR1Q8TCW9 393 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 KIFC1Q9BW19 673 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 ING2Q9H160 280 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 MLXIPLQ9NP71 852 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 ACSS2Q9NR19 701 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 GNPTGQ9UJJ9 305 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 PADI2Q9Y2J8 665 aa19.17■□□□□ 0.66
CLN6-206ENST00000565471 UBR5O95071 2799 aaPredicted RBP19.16■□□□□ 0.66
CLN6-206ENST00000565471 KPNA5O15131 536 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 HCRTR1O43613 425 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 CEP104O60308 925 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 PDGFAP04085 211 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 NMBRP28336 390 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 KCNJ1P48048 391 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 CCZ1BP86790 482 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 CCZ1P86791 482 aaPredicted RBP19.16■□□□□ 0.66
CLN6-206ENST00000565471 GRB7Q14451 532 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 DEFB110Q30KQ9 67 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 ARMC3Q5W041 872 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 PAPD7Q5XG87 772 aaKnown RBP19.16■□□□□ 0.66
CLN6-206ENST00000565471 PTRHD1Q6GMV3 140 aaKnown RBP19.16■□□□□ 0.66
CLN6-206ENST00000565471 TLDC1Q6P9B6 456 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 LRRC8BQ6P9F7 803 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 KRT222Q8N1A0 295 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 DNAJC22Q8N4W6 341 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 LINC01555Q8NAE3 123 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 SLC22A18Q96BI1 424 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 SLC25A23Q9BV35 468 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 SRPK3Q9UPE1 567 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 SEC16AO15027 2179 aa19.16■□□□□ 0.66
CLN6-206ENST00000565471 SETXQ7Z333 2677 aaKnown RBP19.15■□□□□ 0.66
CLN6-206ENST00000565471 ZSCAN9O15535 394 aaPredicted RBP19.15■□□□□ 0.66
CLN6-206ENST00000565471 NDUFS3O75489 264 aa19.15■□□□□ 0.66
CLN6-206ENST00000565471 TMEM63AO94886 807 aa19.15■□□□□ 0.66
CLN6-206ENST00000565471 S1PR4O95977 384 aa19.15■□□□□ 0.66
CLN6-206ENST00000565471 CD9P21926 228 aa19.15■□□□□ 0.66
CLN6-206ENST00000565471 PGDP52209 483 aa19.15■□□□□ 0.66
CLN6-206ENST00000565471 CHAF1BQ13112 559 aa19.15■□□□□ 0.66
CLN6-206ENST00000565471 PRELID2Q8N945 189 aa19.15■□□□□ 0.66
CLN6-206ENST00000565471 OR2L8Q8NGY9 312 aa19.15■□□□□ 0.66
CLN6-206ENST00000565471 CFAP61Q8NHU2 1237 aa19.15■□□□□ 0.66
CLN6-206ENST00000565471 RAB11FIP5Q9BXF6 653 aa19.15■□□□□ 0.66
CLN6-206ENST00000565471 SPRTNQ9H040 489 aaPredicted RBP19.15■□□□□ 0.66
CLN6-206ENST00000565471 SYBUQ9NX95 663 aa19.15■□□□□ 0.66
CLN6-206ENST00000565471 PLCL2Q9UPR0 1127 aa19.15■□□□□ 0.66
CLN6-206ENST00000565471 MRFAP1Q9Y605 127 aa19.15■□□□□ 0.66
CLN6-206ENST00000565471 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.14■□□□□ 0.65
CLN6-206ENST00000565471 RASGRF2O14827 1237 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 NRDCO43847 1150 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 SNRNP200O75643 2136 aaKnown RBP19.14■□□□□ 0.65
CLN6-206ENST00000565471 CEACAM4O75871 244 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 CD63P08962 238 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 CBSLP0DN79 551 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 MAGP20916 626 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 MGAT1P26572 445 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 ARNTP27540 789 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 CBSP35520 551 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 MAGEA6P43360 314 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 IGFBP7Q16270 282 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 FAM69BQ5VUD6 431 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 MRNIPQ6NTE8 343 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 MED25Q71SY5 747 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 RAB43Q86YS6 212 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 TMEM102Q8N9M5 508 aaPredicted RBP19.14■□□□□ 0.65
CLN6-206ENST00000565471 GSDMBQ8TAX9 411 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 MFSD3Q96ES6 412 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 GBP5Q96PP8 586 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 SOX13Q9UN79 622 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 PPP2R2CQ9Y2T4 447 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 PCDHGB7Q9Y5F8 929 aa19.14■□□□□ 0.65
CLN6-206ENST00000565471 FER1L5A0AVI2 2057 aa19.13■□□□□ 0.65
CLN6-206ENST00000565471 KLF7O75840 302 aaPredicted RBP19.13■□□□□ 0.65
CLN6-206ENST00000565471 VAPBO95292 243 aa19.13■□□□□ 0.65
CLN6-206ENST00000565471 FKBP9O95302 570 aa19.13■□□□□ 0.65
CLN6-206ENST00000565471 CXCR5P32302 372 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms