RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 OR1G1P47890 313 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 GPR15P49685 360 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 SNRPD2P62316 118 aaKnown RBP13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 FAM171BQ6P995 826 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 MFSD6LQ8IWD5 586 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 ZNF540Q8NDQ6 660 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 ZFAND1Q8TCF1 268 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 RBM4BQ9BQ04 359 aaKnown RBP13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 RBM4Q9BWF3 364 aaKnown RBP13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 TNKS2Q9H2K2 1166 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 RAPGEFL1Q9UHV5 662 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 C3orf18Q9UK00 162 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 PTCH2Q9Y6C5 1203 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 A0A0U1RQS6 177 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 LOC110117498-PIK3R3F6TDL0 507 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 TULP3O75386 442 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 CYP2A6P11509 494 aaPredicted RBP13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 RYKP34925 604 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 UGT2B10P36537 528 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 MLLT3P42568 568 aaPredicted RBP13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 MAPK12P53778 367 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 CSHL1Q14406 222 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 SLC39A12Q504Y0 691 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 PAGE3Q5JUK9 113 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 ARHGAP36Q6ZRI8 547 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 OR2A14Q96R47 310 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 SCN3BQ9NY72 215 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 USE1Q9NZ43 259 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 TMPRSS11EQ9UL52 423 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 FAM95CA0A1B0GW59 222 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 HACD1B0YJ81 288 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 AKR7A2O43488 359 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 CST1P01037 141 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 LIPAP38571 399 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 EEFSECP57772 596 aaKnown RBP13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 YWHAHQ04917 246 aaPredicted RBP13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 FAPQ12884 760 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 CTBP1Q13363 440 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 EFR3AQ14156 821 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 DDR2Q16832 855 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 ARMC4Q5T2S8 1044 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 LAIR1Q6GTX8 287 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 BLOC1S3Q6QNY0 202 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 DENND6AQ8IWF6 608 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 TM9SF2Q99805 663 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 CSNK1G1Q9HCP0 422 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 GLTPQ9NZD2 209 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 AP3M1Q9Y2T2 418 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 PCDHB14Q9Y5E9 798 aa13.74□□□□□ -0.21
GTF3C1-203ENST00000562609 TET1Q8NFU7 2136 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 PNMA8CA0A1B0GUJ8 204 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 A8MUA0 341 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 ZBTB24O43167 697 aaPredicted RBP13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 RGS10O43665 173 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 PDGFAP04085 211 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 TRAPPC2P0DI81 140 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 TRAPPC2BP0DI82 140 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 CFL1P23528 166 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 PTPN3P26045 913 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 HTR1EP28566 365 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 GRK4P32298 578 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 PBX3P40426 434 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 SLC26A3P40879 764 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 RFX2P48378 723 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 SEMA3BQ13214 749 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 SMN1Q16637 294 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 CLLU1OSQ5K130 101 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 RNF180Q86T96 592 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 FAM86B1Q8N7N1 296 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 PCSK9Q8NBP7 692 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 LINC01599Q8WXQ3 324 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 SLC38A4Q969I6 547 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 MMP28Q9H239 520 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 NDFIP2Q9NV92 336 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 INTS7Q9NVH2 962 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 RCOR3Q9P2K3 495 aaPredicted RBP13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 AGO1Q9UL18 857 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 KLHL20Q9Y2M5 609 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 A3GALT2U3KPV4 340 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 LOC100506127A0A0U1RQW1 187 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 SUPT7LO94864 414 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 GADD45AP24522 165 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 GATMP50440 423 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 TAS2R39P59534 338 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 PAFAH1B3Q15102 231 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 SPATA2LQ8IUW3 424 aaPredicted RBP13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 EID3Q8N140 333 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 DTWD1Q8N5C7 304 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 TTC9BQ8N6N2 239 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 TMCO6Q96DC7 493 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 NXF2Q9GZY0 626 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 KCNN2Q9H2S1 579 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 RNF167Q9H6Y7 350 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 PEX16Q9Y5Y5 336 aa13.73□□□□□ -0.21
GTF3C1-203ENST00000562609 A0A1W2PP18 115 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 OR2A25A4D2G3 310 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 M0QZQ0 153 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 SLC9A3R1O14745 358 aaPredicted RBP13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 TSPAN4O14817 238 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms