RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 A0A0J9YY10 115 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 ISM1B1AKI9 464 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 SUV39H1O43463 412 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 HCRTR1O43613 425 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 NDUFS3O75489 264 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 RORAP35398 523 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 RAB28P51157 221 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 ITGA1P56199 1179 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 RPS15P62841 145 aaKnown RBP16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 CDK16Q00536 496 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 PTCHD3Q3KNS1 767 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 CTSL3PQ5NE16 218 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 FAM69BQ5VUD6 431 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 FAM198BQ6UWH4 519 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 ZNF517Q6ZMY9 492 aaPredicted RBP16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 DCUN1D3Q8IWE4 304 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 FAM20CQ8IXL6 584 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 SYTL1Q8IYJ3 562 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 SLC35F6Q8N357 371 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 ABHD17AQ96GS6 310 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 LRFN5Q96NI6 719 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 IL17FQ96PD4 163 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 PANX3Q96QZ0 392 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 MENTQ9BUN1 341 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 GPR87Q9BY21 358 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 PCMTD2Q9NV79 361 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 IL1RAPL1Q9NZN1 696 aa16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 TSR3Q9UJK0 312 aaKnown RBP16.61■□□□□ 0.25
CDC42BPB-208ENST00000561271 KRT87PA6NCN2 255 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 E7EQ34 232 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 MEN1O00255 615 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 PGRMC1O00264 195 aaKnown RBP16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 KDM1AO60341 852 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 DNAJB5O75953 348 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 RPN2P04844 631 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 KLK3P07288 261 aaPredicted RBP16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 NR1D1P20393 614 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 RPS3P23396 243 aaKnown RBP eCLIP16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 MAGEA6P43360 314 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 BDKRB1P46663 353 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 GRB7Q14451 532 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 KYNUQ16719 465 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 CPZQ66K79 652 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 KIAA0930Q6ICG6 404 aaPredicted RBP16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 CASC4Q6P4E1 433 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 UNC5DQ6UXZ4 953 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 ATG14Q6ZNE5 492 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 SYVN1Q86TM6 617 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 CAND1Q86VP6 1230 aaKnown RBP16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 REXO1L1PQ8IX06 675 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 C2orf73Q8N5S3 287 aaPredicted RBP16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 ENDOVQ8N8Q3 282 aaKnown RBP16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 LINC01555Q8NAE3 123 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 COG1Q8WTW3 980 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 LPGAT1Q92604 370 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 N4BP2L2Q92802 583 aaPredicted RBP16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 FAM136AQ96C01 138 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 PBKQ96KB5 322 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 SLC7A5P2Q9GIP4 190 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 TP53TG5Q9Y2B4 290 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 PTPN13Q12923 2485 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 SHANK1Q9Y566 2161 aa16.6■□□□□ 0.25
CDC42BPB-208ENST00000561271 GOLGA8MH3BSY2 632 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 ZNF749O43361 778 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 NIPSNAP2O75323 286 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 RFPL1O75677 317 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 SLCO2B1O94956 709 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 CTSBP07858 339 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 F7P08709 466 aaPredicted RBP16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 ATXN8OSP0DMR3 200 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 COILP38432 576 aaPredicted RBP16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 GABRA4P48169 554 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 PMS2P54278 862 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 CHAF1BQ13112 559 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 KIR2DS3Q14952 304 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 CYP1B1Q16678 543 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 UGT8Q16880 541 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 SLC5A12Q1EHB4 618 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 TYSND1Q2T9J0 566 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 LACTB2Q53H82 288 aaPredicted RBP16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 COLEC12Q5KU26 742 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 IZUMO3Q5VZ72 239 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 MRNIPQ6NTE8 343 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 CCDC137Q6PK04 289 aaKnown RBP16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 OTOAQ7RTW8 1153 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 LRRC6Q86X45 466 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 SKA2Q8WVK7 121 aaPredicted RBP16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 ZNF669Q96BR6 464 aaPredicted RBP16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 TCTN2Q96GX1 697 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 TRIM55Q9BYV6 548 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 KCNF1Q9H3M0 494 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 SERTAD3Q9UJW9 196 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 FARSAQ9Y285 508 aaKnown RBP16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 KLHL20Q9Y2M5 609 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 NFS1Q9Y697 457 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 RP1L1Q8IWN7 2480 aaPredicted RBP16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 FLNCQ14315 2725 aa16.59■□□□□ 0.25
CDC42BPB-208ENST00000561271 K7EM74 188 aa16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 OR2B3O76000 313 aa16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 MAGP20916 626 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms