RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 SMAPO00193 183 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 RPN2P04844 631 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 CTSBP07858 339 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 NMBRP28336 390 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 GABRA4P48169 554 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 DEFB110Q30KQ9 67 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 PLEKHS1Q5SXH7 462 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 PAPD7Q5XG87 772 aaKnown RBP15.43■□□□□ 0.06
LMX1B-204ENST00000561065 ATG14Q6ZNE5 492 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 TBC1D21Q8IYX1 336 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 SLC22A15Q8IZD6 547 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 KRT222Q8N1A0 295 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 LMNTD1Q8N9Z9 388 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 OR8K5Q8NH50 307 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 MR1Q95460 341 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 PANX3Q96QZ0 392 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 OR2A14Q96R47 310 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 MENTQ9BUN1 341 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 CARD6Q9BX69 1037 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 CHST8Q9H2A9 424 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 PCMTD2Q9NV79 361 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 SYBUQ9NX95 663 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 POLG2Q9UHN1 485 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 POLHQ9Y253 713 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 TP53TG5Q9Y2B4 290 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 PCDHB3Q9Y5E6 796 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 CCDC88CQ9P219 2028 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 PIPSLA2A3N6 862 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 H3BMM5 538 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 CCDC188H7C350 402 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 PRMT5O14744 637 aaPredicted RBP15.43■□□□□ 0.06
LMX1B-204ENST00000561065 GPC4O75487 556 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 DNAJB5O75953 348 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 CAPN1P07384 714 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 CHRM5P08912 532 aaPredicted RBP15.43■□□□□ 0.06
LMX1B-204ENST00000561065 PTPN4P29074 926 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 SHMT2P34897 504 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 PMS2P54278 862 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 GRB7Q14451 532 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 TMED2Q15363 201 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 COLEC12Q5KU26 742 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 ZNF385CQ66K41 422 aaPredicted RBP15.43■□□□□ 0.06
LMX1B-204ENST00000561065 CPZQ66K79 652 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 PTRHD1Q6GMV3 140 aaKnown RBP15.43■□□□□ 0.06
LMX1B-204ENST00000561065 TTC23LQ6PF05 361 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 FAM20CQ8IXL6 584 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 PPIL6Q8IXY8 311 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 DSELQ8IZU8 1212 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 C19orf47Q8N9M1 422 aaKnown RBP15.43■□□□□ 0.06
LMX1B-204ENST00000561065 LRFN5Q96NI6 719 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 TRIM55Q9BYV6 548 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 EPN3Q9H201 632 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 P2RY12Q9H244 342 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 ASIC3Q9UHC3 531 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 CIDEBQ9UHD4 219 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 SOX13Q9UN79 622 aa15.43■□□□□ 0.06
LMX1B-204ENST00000561065 TDRKHQ9Y2W6 561 aaKnown RBP15.43■□□□□ 0.06
LMX1B-204ENST00000561065 MEN1O00255 615 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 WISP1O95388 367 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 PDGFAP04085 211 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 APOA4P06727 396 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 MGAT1P26572 445 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 PKLRP30613 574 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 TLE1Q04724 770 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 HSPA14Q0VDF9 509 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 THOC5Q13769 683 aaKnown RBP15.42■□□□□ 0.06
LMX1B-204ENST00000561065 KCNJ11Q14654 390 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 UGT8Q16880 541 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 PTCHD3Q3KNS1 767 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 IZUMO3Q5VZ72 239 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 TTC27Q6P3X3 843 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 CES3Q6UWW8 571 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 HOOK3Q86VS8 718 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 LMNTD2Q8IXW0 634 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 LINC01555Q8NAE3 123 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 CALML6Q8TD86 181 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 CPT1BQ92523 772 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 MFSD3Q96ES6 412 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 TRIM56Q9BRZ2 755 aaKnown RBP15.42■□□□□ 0.06
LMX1B-204ENST00000561065 NAT9Q9BTE0 207 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 ACTR5Q9H9F9 607 aaPredicted RBP15.42■□□□□ 0.06
LMX1B-204ENST00000561065 FANCEQ9HB96 536 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 PCYOX1Q9UHG3 505 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 GNPTGQ9UJJ9 305 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 MAN2B2Q9Y2E5 1009 aa15.42■□□□□ 0.06
LMX1B-204ENST00000561065 FAM237BA0A1B0GVD1 139 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 KRT87PA6NCN2 255 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 TMEM63AO94886 807 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 VAPBO95292 243 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 RECKO95980 971 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 CYP2A7P20853 494 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 AOAHP28039 575 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 TERF1P54274 439 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 CHAF1BQ13112 559 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 LACTB2Q53H82 288 aaPredicted RBP15.41■□□□□ 0.06
LMX1B-204ENST00000561065 CTSL3PQ5NE16 218 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 ANKRD22Q5VYY1 191 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 SYVN1Q86TM6 617 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 SYTL1Q8IYJ3 562 aa15.41■□□□□ 0.06
LMX1B-204ENST00000561065 ENDOVQ8N8Q3 282 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms