RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 FCRL5Q96RD9 977 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 TRMOQ9BU70 441 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 GLOD4Q9HC38 313 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 COMMD8Q9NX08 183 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 GNGT2O14610 69 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 F9P00740 461 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 ANXA6P08133 673 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 HOXD8P13378 290 aaPredicted RBP15.34■□□□□ 0.05
SYNE3-203ENST00000554873 GADD45AP24522 165 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 POU4F1Q01851 419 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 RHAGQ02094 409 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 MGAT3Q09327 533 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 RAB41Q5JT25 222 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 PLEKHM3Q6ZWE6 761 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 FLCNQ8NFG4 579 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 ST13P5Q8NFI4 369 aaPredicted RBP15.34■□□□□ 0.05
SYNE3-203ENST00000554873 FRS2Q8WU20 508 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 PHF21BQ96EK2 531 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 SLC30A2Q9BRI3 323 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 PRRG3Q9BZD7 231 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 PIF1Q9H611 641 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 SCPEP1Q9HB40 452 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 TREX1Q9NSU2 369 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 RRN3P2A6NIE6 340 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 UBFD1O14562 309 aaKnown RBP15.33■□□□□ 0.04
SYNE3-203ENST00000554873 PMPCBO75439 489 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 CPB1P15086 417 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 MSH3P20585 1137 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 ADRA1AP35348 466 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 CHRNA4P43681 627 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 PPP3CCP48454 512 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 FCGR1BQ92637 280 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 CDCA5Q96FF9 252 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 PCED1BQ96HM7 432 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 TRNT1Q96Q11 434 aaKnown RBP15.33■□□□□ 0.04
SYNE3-203ENST00000554873 LRRC3Q9BY71 257 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 ERVMER34-1Q9H9K5 563 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 KLHL21Q9UJP4 597 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.33■□□□□ 0.04
SYNE3-203ENST00000554873 TIMM13Q9Y5L4 95 aaPredicted RBP15.33■□□□□ 0.04
SYNE3-203ENST00000554873 AUP1Q9Y679 476 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 MRPL42Q9Y6G3 142 aaKnown RBP15.33■□□□□ 0.04
SYNE3-203ENST00000554873 HSPE1-MOB4S4R3N1 261 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 TSPAN4O14817 238 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 AKR7A2O43488 359 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 ANXA9O76027 345 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 DNTTP04053 509 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 SERPINF2P08697 491 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 CCNCP24863 283 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 TIE1P35590 1138 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 PIK3CBP42338 1070 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 SOX9P48436 509 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 KCNK10P57789 538 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 CDC42EP1Q00587 391 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 EMX2Q04743 252 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 CLVS2Q5SYC1 327 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 TMEM65Q6PI78 240 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 SYVN1Q86TM6 617 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 GPC2Q8N158 579 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 YIPF7Q8N8F6 280 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 TTLQ8NG68 377 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 GIMAP5Q96F15 307 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 SIK2Q9H0K1 926 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 GSTO2Q9H4Y5 243 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 ZC4H2Q9NQZ6 224 aa15.33■□□□□ 0.04
SYNE3-203ENST00000554873 TOR1AO14656 332 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 C1QBP02746 253 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 ALPPP05187 535 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 POU3F3P20264 500 aaPredicted RBP15.32■□□□□ 0.04
SYNE3-203ENST00000554873 GRB7Q14451 532 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 PAGE3Q5JUK9 113 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 LAIR1Q6GTX8 287 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 HDDC2Q7Z4H3 204 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 CDH24Q86UP0 819 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 ARHGAP12Q8IWW6 846 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 DTWD1Q8N5C7 304 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 DNAJB3Q8WWF6 145 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 RNF34Q969K3 372 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 ZFP42Q96MM3 310 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 TRAF4Q9BUZ4 470 aaPredicted RBP15.32■□□□□ 0.04
SYNE3-203ENST00000554873 MMP28Q9H239 520 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 WASH6PQ9NQA3 447 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 FBXO10Q9UK96 956 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 AGO1Q9UL18 857 aaKnown RBP15.32■□□□□ 0.04
SYNE3-203ENST00000554873 SNX7Q9UNH6 387 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 ASPDHA6ND91 283 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 HHLA1C9JL84 531 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 E5RI56 91 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 I3L521 148 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 PTGESO14684 152 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 FAM20BO75063 409 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 EEDO75530 441 aaKnown RBP15.32■□□□□ 0.04
SYNE3-203ENST00000554873 RPLP0P05388 317 aaKnown RBP15.32■□□□□ 0.04
SYNE3-203ENST00000554873 TSPAN8P19075 237 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 ZNF33AQ06730 810 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 ARMCX4Q5H9R4 360 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 TAC4Q86UU9 113 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 PAF1Q8N7H5 531 aa15.32■□□□□ 0.04
SYNE3-203ENST00000554873 OR6J1Q8NGC5 347 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms