RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CTTNQ14247 550 aaKnown RBP5.19□□□□□ -1.58
CPSF6-206ENST00000550987 ZNF273Q14593 569 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 PTPRCAPQ14761 206 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 E2F5Q15329 346 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 PPP6R3Q5H9R7 873 aaPredicted RBP5.19□□□□□ -1.58
CPSF6-206ENST00000550987 PLA2G4FQ68DD2 849 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 PAPD4Q6PIY7 484 aaKnown RBP5.19□□□□□ -1.58
CPSF6-206ENST00000550987 SHC4Q6S5L8 630 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 GPR180Q86V85 440 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 BEST3Q8N1M1 668 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 ARL10Q8N8L6 244 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 EXD1Q8NHP7 514 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 MPLKIPQ8TAP9 179 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 WDR20Q8TBZ3 569 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 UTP15Q8TED0 518 aaKnown RBP5.19□□□□□ -1.58
CPSF6-206ENST00000550987 SLC25A28Q96A46 364 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 ARSGQ96EG1 525 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 MS4A10Q96PG2 267 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 TMEM79Q9BSE2 394 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 DNAI2Q9GZS0 605 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 C2orf40Q9H1Z8 148 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 VPS33BQ9H267 617 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 MMADHCQ9H3L0 296 aaPredicted RBP5.19□□□□□ -1.58
CPSF6-206ENST00000550987 C17orf75Q9HAS0 396 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 DDX43Q9NXZ2 648 aaKnown RBP5.19□□□□□ -1.58
CPSF6-206ENST00000550987 COQ3Q9NZJ6 369 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.19□□□□□ -1.58
CPSF6-206ENST00000550987 ING1Q9UK53 422 aaPredicted RBP5.19□□□□□ -1.58
CPSF6-206ENST00000550987 B3GALT5Q9Y2C3 310 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 SQORQ9Y6N5 450 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 R4GN57 208 aa5.19□□□□□ -1.58
CPSF6-206ENST00000550987 hDV102S1A0JD36 115 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 ANXA2P2A6NMY6 339 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 H0YAE9 185 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 TMEM189-UBE2V1I3L0A0 370 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 I6L893 689 aaPredicted RBP5.18□□□□□ -1.58
CPSF6-206ENST00000550987 J3KR12 359 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 WNT9BO14905 357 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 TIMM23O14925 209 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 KCNN4O15554 427 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 STX6O43752 255 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 SSX4O60224 188 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 GP1BBP13224 206 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 EEF1B2P24534 225 aaKnown RBP5.18□□□□□ -1.58
CPSF6-206ENST00000550987 HRH2P25021 359 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 RPS12P25398 132 aaKnown RBP5.18□□□□□ -1.58
CPSF6-206ENST00000550987 HOXC8P31273 242 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 KRT2P35908 639 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 TCF7P36402 384 aaPredicted RBP5.18□□□□□ -1.58
CPSF6-206ENST00000550987 MMP13P45452 471 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 CD81P60033 236 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 SPOCK1Q08629 439 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 UBE2V1Q13404 147 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 PPIGQ13427 754 aaKnown RBP eCLIP5.18□□□□□ -1.584e-9■□□□□ 10.1
CPSF6-206ENST00000550987 SRSF7Q16629 238 aaKnown RBP eCLIP5.18□□□□□ -1.58
CPSF6-206ENST00000550987 SMN1Q16637 294 aaKnown RBP5.18□□□□□ -1.58
CPSF6-206ENST00000550987 DECR1Q16698 335 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 Q4G0T1 1027 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 KCNT1Q5JUK3 1230 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 DNTTIP2Q5QJE6 756 aaKnown RBP5.18□□□□□ -1.58
CPSF6-206ENST00000550987 MPP7Q5T2T1 576 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 C10orf25Q5T742 122 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 SFMBT2Q5VUG0 894 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 ALS2CLQ60I27 953 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 FRG2Q64ET8 278 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 IYDQ6PHW0 289 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 Q6ZSV7 163 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 MSANTD1Q6ZTZ1 278 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 ADGRG3Q86Y34 549 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 CREBRFQ8IUR6 639 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 KLHL7Q8IXQ5 586 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 PCDH20Q8N6Y1 951 aaKnown RBP5.18□□□□□ -1.58
CPSF6-206ENST00000550987 NANOGP1Q8N7R0 232 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 HMGCLL1Q8TB92 370 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 ADAMTS14Q8WXS8 1223 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 FAM84BQ96KN1 310 aaPredicted RBP5.18□□□□□ -1.58
CPSF6-206ENST00000550987 NLRP4Q96MN2 994 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 FZD8Q9H461 694 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 TRNAU1APQ9NX07 287 aaKnown RBP5.18□□□□□ -1.58
CPSF6-206ENST00000550987 TRMT1Q9NXH9 659 aaKnown RBP5.18□□□□□ -1.58
CPSF6-206ENST00000550987 HEY2Q9UBP5 337 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 FBXL2Q9UKC9 423 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 KLHL20Q9Y2M5 609 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 LOXL2Q9Y4K0 774 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 LIPGQ9Y5X9 500 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 DOPEY2Q9Y3R5 2298 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 EVC2Q86UK5 1308 aa5.18□□□□□ -1.58
CPSF6-206ENST00000550987 KTN1Q86UP2 1357 aaKnown RBP5.17□□□□□ -1.58
CPSF6-206ENST00000550987 CSMD1Q96PZ7 3565 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 A0A0U1RQK1 487 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 RPS10-NUDT3A0A1W2PQS6 291 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 ZNF320A2RRD8 509 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 OR6C76A6NM76 312 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 SLC30A4O14863 429 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 ZNF217O75362 1048 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 KCNJ4P48050 445 aa5.17□□□□□ -1.58
CPSF6-206ENST00000550987 HNRNPH2P55795 449 aaKnown RBP5.17□□□□□ -1.58
CPSF6-206ENST00000550987 SRSF4Q08170 494 aaKnown RBP5.17□□□□□ -1.58
CPSF6-206ENST00000550987 NFE2L1Q14494 772 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms