RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 CALCOCO2Q13137 446 aa12.89□□□□□ -0.35
CEP290-205ENST00000550962 KYNUQ16719 465 aa12.89□□□□□ -0.35
CEP290-205ENST00000550962 BBS9Q3SYG4 887 aa12.89□□□□□ -0.35
CEP290-205ENST00000550962 CTSL3PQ5NE16 218 aa12.89□□□□□ -0.35
CEP290-205ENST00000550962 KIAA0408Q6ZU52 694 aa12.89□□□□□ -0.35
CEP290-205ENST00000550962 CENPUQ71F23 418 aa12.89□□□□□ -0.35
CEP290-205ENST00000550962 VRK3Q8IV63 474 aa12.89□□□□□ -0.35
CEP290-205ENST00000550962 C19orf47Q8N9M1 422 aaKnown RBP12.89□□□□□ -0.35
CEP290-205ENST00000550962 GALNT6Q8NCL4 622 aa12.89□□□□□ -0.35
CEP290-205ENST00000550962 SLC39A7Q92504 469 aa12.89□□□□□ -0.35
CEP290-205ENST00000550962 KCNJ9Q92806 393 aa12.89□□□□□ -0.35
CEP290-205ENST00000550962 EBNA1BP2Q99848 306 aaKnown RBP12.89□□□□□ -0.35
CEP290-205ENST00000550962 CHRNA10Q9GZZ6 450 aa12.89□□□□□ -0.35
CEP290-205ENST00000550962 SPATA7Q9P0W8 599 aa12.89□□□□□ -0.35
CEP290-205ENST00000550962 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.89□□□□□ -0.35
CEP290-205ENST00000550962 RALYQ9UKM9 306 aaKnown RBP12.89□□□□□ -0.35
CEP290-205ENST00000550962 CELSR3Q9NYQ7 3312 aa12.89□□□□□ -0.35
CEP290-205ENST00000550962 FAM187AA6NFU0 413 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 E7EQ34 232 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 RASGRF2O14827 1237 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 TTI1O43156 1089 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 NIPSNAP2O75323 286 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 VPS26AO75436 327 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 CBSLP0DN79 551 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 ST6GAL1P15907 406 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 CD9P21926 228 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 CBSP35520 551 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 DLSTP36957 453 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 HSD17B2P37059 387 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 SLC1A2P43004 574 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 ITGA1P56199 1179 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 ILF2Q12905 390 aaKnown RBP12.88□□□□□ -0.35
CEP290-205ENST00000550962 GPR19Q15760 415 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 KCTD19Q17RG1 926 aaPredicted RBP12.88□□□□□ -0.35
CEP290-205ENST00000550962 CRTC2Q53ET0 693 aaPredicted RBP12.88□□□□□ -0.35
CEP290-205ENST00000550962 HSP90AA5PQ58FG0 334 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 KIAA1614Q5VZ46 1190 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 PWWP2BQ6NUJ5 590 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 CNSTQ6PJW8 725 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 NEK10Q6ZWH5 1172 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 TIPARPQ7Z3E1 657 aaKnown RBP12.88□□□□□ -0.35
CEP290-205ENST00000550962 OR2L8Q8NGY9 312 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 DENND1AQ8TEH3 1009 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 ZNF501Q96CX3 271 aaPredicted RBP12.88□□□□□ -0.35
CEP290-205ENST00000550962 CLIP3Q96DZ5 547 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 TRAPPC9Q96Q05 1148 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 KRT12Q99456 494 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 C17orf62Q9BQA9 187 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 PPANQ9NQ55 473 aaKnown RBP12.88□□□□□ -0.35
CEP290-205ENST00000550962 FBXO6Q9NRD1 293 aaPredicted RBP12.88□□□□□ -0.35
CEP290-205ENST00000550962 IRAK4Q9NWZ3 460 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 FBXO5Q9UKT4 447 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 PLAGL1Q9UM63 463 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 AP1M2Q9Y6Q5 423 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 PTPRQQ9UMZ3 2332 aa12.88□□□□□ -0.35
CEP290-205ENST00000550962 LAMA5O15230 3695 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 DSPP15924 2871 aaKnown RBP12.87□□□□□ -0.35
CEP290-205ENST00000550962 AHCTF1Q8WYP5 2266 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 SDK2Q58EX2 2172 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 LOC101059948A0A1B0GTJ6 334 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 PABPN1LA6NDY0 278 aaKnown RBP12.87□□□□□ -0.35
CEP290-205ENST00000550962 TMEM150CB9EJG8 249 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 EIF3FO00303 357 aaPredicted RBP12.87□□□□□ -0.35
CEP290-205ENST00000550962 SEC31AO94979 1220 aaKnown RBP12.87□□□□□ -0.35
CEP290-205ENST00000550962 C1orf105O95561 183 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 ZNF28P17035 718 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 TCN2P20062 427 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 SKIV2L2P42285 1042 aaKnown RBP12.87□□□□□ -0.35
CEP290-205ENST00000550962 RGS4P49798 205 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 ITGA8P53708 1063 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 RPS15P62841 145 aaKnown RBP12.87□□□□□ -0.35
CEP290-205ENST00000550962 CKAP4Q07065 602 aaKnown RBP12.87□□□□□ -0.35
CEP290-205ENST00000550962 CTBP1Q13363 440 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 SOWAHCQ53LP3 525 aaPredicted RBP12.87□□□□□ -0.35
CEP290-205ENST00000550962 HIBCHQ6NVY1 386 aaPredicted RBP12.87□□□□□ -0.35
CEP290-205ENST00000550962 DENND6AQ8IWF6 608 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 PALM2Q8IXS6 379 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 STARD8Q92502 1023 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 CERS2Q96G23 380 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 LRFN5Q96NI6 719 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 OR2A14Q96R47 310 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 DPH2Q9BQC3 489 aaPredicted RBP12.87□□□□□ -0.35
CEP290-205ENST00000550962 GPR87Q9BY21 358 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 TRIM31Q9BZY9 425 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 LHX9Q9NQ69 397 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 IARS2Q9NSE4 1012 aaKnown RBP12.87□□□□□ -0.35
CEP290-205ENST00000550962 TAS2R13Q9NYV9 303 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 IL1RAPL1Q9NZN1 696 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 ZC3H7BQ9UGR2 993 aaKnown RBP12.87□□□□□ -0.35
CEP290-205ENST00000550962 TRMT6Q9UJA5 497 aaKnown RBP12.87□□□□□ -0.35
CEP290-205ENST00000550962 CROTQ9UKG9 612 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 CORO1CQ9ULV4 474 aaPredicted RBP12.87□□□□□ -0.35
CEP290-205ENST00000550962 UTP11Q9Y3A2 253 aaKnown RBP12.87□□□□□ -0.35
CEP290-205ENST00000550962 ZFHX4Q86UP3 3567 aa12.87□□□□□ -0.35
CEP290-205ENST00000550962 CFAP47Q6ZTR5 3102 aa12.86□□□□□ -0.35
CEP290-205ENST00000550962 RECKO95980 971 aa12.86□□□□□ -0.35
CEP290-205ENST00000550962 MPC1LP0DKB6 136 aa12.86□□□□□ -0.35
CEP290-205ENST00000550962 AGXTP21549 392 aa12.86□□□□□ -0.35
CEP290-205ENST00000550962 IVDP26440 423 aa12.86□□□□□ -0.35
CEP290-205ENST00000550962 SRSF6Q13247 344 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms