RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 BATF2Q8N1L9 274 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 SPATA6LQ8N4H0 392 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 OCC1Q8TAD7 63 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 BBS10Q8TAM1 723 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 CEP76Q8TAP6 659 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 TBC1D16Q8TBP0 767 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 RAD54LQ92698 747 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 ERGIC1Q969X5 290 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 MOB3AQ96BX8 217 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 AP2M1Q96CW1 435 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 NAP1L3Q99457 506 aaPredicted RBP4.12□□□□□ -1.75
SCAF11-210ENST00000547654 SLX1AQ9BQ83 275 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 FNDC11Q9BVV2 318 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 NPFFR1Q9GZQ6 430 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 SRD5A3Q9H8P0 318 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 MKKSQ9NPJ1 570 aaPredicted RBP4.12□□□□□ -1.75
SCAF11-210ENST00000547654 DNAJC11Q9NVH1 559 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 FAM118AQ9NWS6 357 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 CGNQ9P2M7 1197 aaKnown RBP4.12□□□□□ -1.75
SCAF11-210ENST00000547654 SLC9A2Q9UBY0 812 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 UTS2RQ9UKP6 389 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 EXOC7Q9UPT5 735 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 STRAPQ9Y3F4 350 aaKnown RBP4.12□□□□□ -1.75
SCAF11-210ENST00000547654 GRIP1Q9Y3R0 1128 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 KIF3AQ9Y496 699 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 NFE2L3Q9Y4A8 694 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 NPHP3Q7Z494 1330 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 ZNF541Q9H0D2 1346 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 CEP350Q5VT06 3117 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 TRBV2A0A0J9YWF9 115 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 ANKUB1A6NFN9 424 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 CACNB4O00305 520 aaPredicted RBP4.11□□□□□ -1.75
SCAF11-210ENST00000547654 HS3ST1O14792 307 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 PLPP2O43688 288 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 TOMM70O94826 608 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 LETM1O95202 739 aaPredicted RBP4.11□□□□□ -1.75
SCAF11-210ENST00000547654 SERPING1P05155 500 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 SPP1P10451 314 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 VCLP18206 1134 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 MAOAP21397 527 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 SFNP31947 248 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 ASMTP46597 345 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 PGGT1BP53609 377 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 RAD23BP54727 409 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 KCNJ10P78508 379 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 LRRC74AQ0VAA2 488 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 PKP1Q13835 747 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 MELKQ14680 651 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 SLC39A14Q15043 492 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 UGP2Q16851 508 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 TCTE1Q5JU00 501 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 DCAF12L2Q5VW00 463 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 ALS2CLQ60I27 953 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 CAPRIN2Q6IMN6 1127 aaKnown RBP4.11□□□□□ -1.75
SCAF11-210ENST00000547654 NOTUMQ6P988 496 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 FIGLAQ6QHK4 219 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 FAM198BQ6UWH4 519 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 ISLR2Q6UXK2 745 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 MTSS1LQ765P7 747 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 PIGWQ7Z7B1 504 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 FOXP4Q8IVH2 680 aaPredicted RBP4.11□□□□□ -1.75
SCAF11-210ENST00000547654 ZNF611Q8N823 705 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 DENND6BQ8NEG7 585 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 ZNF606Q8WXB4 792 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 RIT1Q92963 219 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 EME1Q96AY2 570 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 TMEM18Q96B42 140 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 CDCA5Q96FF9 252 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 STAMBPL1Q96FJ0 436 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 CPNE1Q99829 537 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 PKP2Q99959 881 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 WDR83Q9BRX9 315 aaKnown RBP4.11□□□□□ -1.75
SCAF11-210ENST00000547654 LSG1Q9H089 658 aaKnown RBP4.11□□□□□ -1.75
SCAF11-210ENST00000547654 LMAN1LQ9HAT1 526 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 THSD1Q9NS62 852 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 SPASTQ9UBP0 616 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 CCPG1Q9ULG6 757 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 TEX264Q9Y6I9 313 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 CLCA3PQ9Y6N3 262 aa4.11□□□□□ -1.75
SCAF11-210ENST00000547654 ZCCHC11Q5TAX3 1644 aaKnown RBP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 A0A0A6YYC8 382 aaPredicted RBP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 ARHGAP42A6NI28 874 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 A6NNC1 897 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 KBTBD13C9JR72 458 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 F8W810 466 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 I3L1I5 382 aaPredicted RBP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 MCF2LO15068 1137 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 AP5Z1O43299 807 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 PPIP5K2O43314 1243 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 UGDHO60701 494 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 GLCEO94923 617 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 ACSL3O95573 720 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 MT-ATP6P00846 226 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 DANCRP0C864 163 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 PLA2G2AP14555 144 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 ETS1P14921 441 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 TIA1P31483 386 aaKnown RBP eCLIP4.1□□□□□ -1.75
SCAF11-210ENST00000547654 TNFSF8P32971 234 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 HSPA1LP34931 641 aa4.1□□□□□ -1.75
SCAF11-210ENST00000547654 SERPINB6P35237 376 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms