RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 TTC30BQ8N4P2 665 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 POU5F2Q8N7G0 328 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 LPCAT1Q8NF37 534 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 KCNJ9Q92806 393 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 SGF29Q96ES7 293 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 PDLIM5Q96HC4 596 aaKnown RBP16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 NAF1Q96HR8 494 aaKnown RBP16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 B4GALT6Q9UBX8 382 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 FREM2Q5SZK8 3169 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 A0A0U1RQS6 177 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 FAM221BA6H8Z2 402 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 A8MX80 341 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 PGLSO95336 258 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 PDHA1P08559 390 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 NME1P15531 152 aaKnown RBP16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 LHCGRP22888 699 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 HMGCLP35914 325 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 CACNG1Q06432 222 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 TBL3Q12788 808 aaKnown RBP16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 UNC50Q53HI1 259 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 ERAP2Q6P179 960 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 LRRC74BQ6ZQY2 392 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 DCP2Q8IU60 420 aaKnown RBP16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 CBARPQ8N350 705 aaPredicted RBP16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 PLA2G15Q8NCC3 412 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 PIH1D2Q8WWB5 315 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 DNAJC9Q8WXX5 260 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 GATA6Q92908 595 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 ATOH8Q96SQ7 321 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 TCEAL2Q9H3H9 227 aaPredicted RBP16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 TMEM45AQ9NWC5 275 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 FTSJ1Q9UET6 329 aa16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 GOLGA4Q13439 2230 aaKnown RBP16.89■□□□□ 0.29
RBFOX1-207ENST00000547338 A0A1W2PQ67 120 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 H0Y3Z8 333 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 H3BMM5 538 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 UBDO15205 165 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 KLK8O60259 260 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 KRT36O76013 467 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 SUPT7LO94864 414 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 CSF2P04141 144 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 MC4RP32245 332 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 EPHB1P54762 984 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 XIAPP98170 497 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 SEMA3AQ14563 771 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 PDCD2Q16342 344 aaPredicted RBP16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 PROX2Q3B8N5 592 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 LDB1Q86U70 411 aaPredicted RBP16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 PARGQ86W56 976 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 CNDP2Q96KP4 475 aaKnown RBP16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 MCCC1Q96RQ3 725 aaPredicted RBP16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 MRPL1Q9BYD6 325 aaKnown RBP16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 S100A14Q9HCY8 104 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 IL17CQ9P0M4 197 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 APPL1Q9UKG1 709 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 PPIL1Q9Y3C6 166 aa16.88■□□□□ 0.29
RBFOX1-207ENST00000547338 LY6G6EA0A0G2JKS1 128 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 NPIPB15A6NHN6 443 aaPredicted RBP16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 MAP3K7O43318 606 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 SIGLEC6O43699 453 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 RECQL5O94762 991 aaPredicted RBP16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 TRIM16O95361 564 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 SLC4A1P02730 911 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 ANPEPP15144 967 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 RPS3P23396 243 aaKnown RBP eCLIP16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 IL2P60568 153 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 ART3Q13508 389 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 MUM1Q2TAK8 710 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 INAVAQ3KP66 663 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 ANKS6Q68DC2 871 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 HACD2Q6Y1H2 254 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 SNX32Q86XE0 403 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 RBFAQ8N0V3 343 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 ZNF548Q8NEK5 533 aaPredicted RBP16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 AGR3Q8TD06 166 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 PTERQ96BW5 349 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 PHF21BQ96EK2 531 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 COQ10AQ96MF6 247 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 TRMT6Q9UJA5 497 aaKnown RBP16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 NEUROG3Q9Y4Z2 214 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 COPG1Q9Y678 874 aaKnown RBP16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 SLC30A1Q9Y6M5 507 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 U3KQA8 63 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 DMXL2Q8TDJ6 3036 aa16.87■□□□□ 0.29
RBFOX1-207ENST00000547338 UBA6A0AVT1 1052 aaPredicted RBP16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 NEMP2A6NFY4 417 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 C1QTNF9BB2RNN3 333 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 CCL22O00626 93 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 LDOC1O95751 146 aaPredicted RBP16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 MLYCDO95822 493 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 C1QTNF9P0C862 333 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 FMO4P31512 558 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 CCR10P46092 362 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 KCNC1P48547 511 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 MRPL19P49406 292 aaKnown RBP16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 PGGT1BP53609 377 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 YPEL5P62699 121 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 POLR2LP62875 67 aaKnown RBP16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 INPP5AQ14642 412 aa16.86■□□□□ 0.29
RBFOX1-207ENST00000547338 ZFP1Q6P2D0 407 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms