RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 VMP1Q96GC9 406 aa10.32□□□□□ -0.76
PHACTR3-209ENST00000541461 ZNF641Q96N77 438 aaPredicted RBP10.32□□□□□ -0.76
PHACTR3-209ENST00000541461 BARD1Q99728 777 aaKnown RBP10.32□□□□□ -0.76
PHACTR3-209ENST00000541461 FBXO44Q9H4M3 255 aa10.32□□□□□ -0.76
PHACTR3-209ENST00000541461 MAGEE1Q9HCI5 957 aa10.32□□□□□ -0.76
PHACTR3-209ENST00000541461 POLE4Q9NR33 117 aa10.32□□□□□ -0.76
PHACTR3-209ENST00000541461 VNN3Q9NY84 501 aa10.32□□□□□ -0.76
PHACTR3-209ENST00000541461 C3orf18Q9UK00 162 aa10.32□□□□□ -0.76
PHACTR3-209ENST00000541461 CCL27Q9Y4X3 112 aa10.32□□□□□ -0.76
PHACTR3-209ENST00000541461 PCDHGC4Q9Y5F7 938 aa10.32□□□□□ -0.76
PHACTR3-209ENST00000541461 COMMD10Q9Y6G5 202 aa10.32□□□□□ -0.76
PHACTR3-209ENST00000541461 EYSQ5T1H1 3165 aa10.32□□□□□ -0.76
PHACTR3-209ENST00000541461 MICAL3Q7RTP6 2002 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 PLXNA3P51805 1871 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 CREG1O75629 220 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 GABARAPO95166 117 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 ANGPTL1O95841 491 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 SERPINA1P01009 418 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 CYP4B1P13584 511 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 TYMPP19971 482 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 LPOP22079 712 aaPredicted RBP10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 TGM1P22735 817 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 HOXD9P28356 352 aaPredicted RBP10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 AKT1P31749 480 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 HSPA7P48741 367 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 IL1RL1Q01638 556 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 DGCR6Q14129 220 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 SIM2Q14190 667 aaPredicted RBP10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 INAVAQ3KP66 663 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 SGO1Q5FBB7 561 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 OTOP2Q7RTS6 562 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 MICU2Q8IYU8 434 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 LGI2Q8N0V4 545 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 MFSD4AQ8N468 514 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 LIX1Q8N485 282 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 ATAD1Q8NBU5 361 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 CLHC1Q8NHS4 586 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 BADQ92934 168 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 ZBTB18Q99592 522 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 MGME1Q9BQP7 344 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 RHNO1Q9BSD3 238 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 CINPQ9BW66 212 aaPredicted RBP10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 NSUN3Q9H649 340 aaKnown RBP10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 DCAF13Q9NV06 445 aaKnown RBP10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 NUDT4Q9NZJ9 180 aa10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 INTS6Q9UL03 887 aaKnown RBP10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 FAM32AQ9Y421 112 aaKnown RBP10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 NUP214P35658 2090 aaPredicted RBP10.31□□□□□ -0.76
PHACTR3-209ENST00000541461 SLC16A6O15403 523 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 KDM1AO60341 852 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 SCELO95171 688 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 ITGB6P18564 788 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 MSH3P20585 1137 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 TACR2P21452 398 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 RYKP34925 604 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 TGFBR1P36897 503 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 GDF5P43026 501 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 MAPKAPK2P49137 400 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 TTPAP49638 278 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 KCNQ1P51787 676 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 CLCN7P51798 805 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 TRAF3Q13114 568 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 PCBP2Q15366 365 aaKnown RBP eCLIP10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 NPTX1Q15818 432 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 RUNDC3AQ59EK9 446 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 ALG1LQ6GMV1 187 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 TMEM53Q6P2H8 277 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 CNKSR3Q6P9H4 555 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 CCDC81Q6ZN84 652 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 B3GNT8Q7Z7M8 397 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 CYP4Z1Q86W10 505 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 ZNF280BQ86YH2 543 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 CHPFQ8IZ52 775 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 ZCCHC7Q8N3Z6 543 aaKnown RBP10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 PIK3C3Q8NEB9 887 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 RORBQ92753 470 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 FBXO32Q969P5 355 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 DPY30Q9C005 99 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 TRIT1Q9H3H1 467 aaKnown RBP10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 ELOVL2Q9NXB9 296 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 PCDHB8Q9UN66 801 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 ZNF232Q9UNY5 417 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 PCDHGA10Q9Y5H3 936 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 ZBBXA8MT70 800 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 INSIG1O15503 277 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 DNAJB5O75953 348 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 GSNP06396 782 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 PGRP06401 933 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 CCDC159P0C7I6 412 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 NCS1P62166 190 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 FAM189BP81408 668 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 DEFB103AP81534 67 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 TAF10Q12962 218 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 MAPK11Q15759 364 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 SBSNQ6UWP8 590 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 GPR149Q86SP6 731 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 ADCK1Q86TW2 530 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 OR6Q1Q8NGQ2 317 aa10.3□□□□□ -0.76
PHACTR3-209ENST00000541461 S100ZQ8WXG8 99 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms