RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.18□□□□□ -0.942e-6■■■■□ 22.9
LDHA-218ENST00000540430 ITFG1Q8TB96 612 aa9.18□□□□□ -0.94
LDHA-218ENST00000540430 BRSK1Q8TDC3 778 aa9.18□□□□□ -0.94
LDHA-218ENST00000540430 ISG20Q96AZ6 181 aaKnown RBP9.18□□□□□ -0.94
LDHA-218ENST00000540430 TSPAN17Q96FV3 270 aa9.18□□□□□ -0.94
LDHA-218ENST00000540430 HPDLQ96IR7 371 aa9.18□□□□□ -0.94
LDHA-218ENST00000540430 C8orf48Q96LL4 319 aa9.18□□□□□ -0.94
LDHA-218ENST00000540430 VPS35Q96QK1 796 aa9.18□□□□□ -0.94
LDHA-218ENST00000540430 PHOX2BQ99453 314 aa9.18□□□□□ -0.94
LDHA-218ENST00000540430 COLEC11Q9BWP8 271 aa9.18□□□□□ -0.94
LDHA-218ENST00000540430 NXF3Q9H4D5 531 aaKnown RBP9.18□□□□□ -0.94
LDHA-218ENST00000540430 ASB7Q9H672 318 aa9.18□□□□□ -0.94
LDHA-218ENST00000540430 DDX28Q9NUL7 540 aaKnown RBP9.18□□□□□ -0.94
LDHA-218ENST00000540430 COMMD8Q9NX08 183 aa9.18□□□□□ -0.94
LDHA-218ENST00000540430 MIOSQ9NXC5 875 aa9.18□□□□□ -0.94
LDHA-218ENST00000540430 SPEF1Q9Y4P9 236 aa9.18□□□□□ -0.94
LDHA-218ENST00000540430 GPR45Q9Y5Y3 372 aa9.18□□□□□ -0.94
LDHA-218ENST00000540430 RIF1Q5UIP0 2472 aaKnown RBP9.18□□□□□ -0.94
LDHA-218ENST00000540430 CFAP54Q96N23 3096 aa9.18□□□□□ -0.94
LDHA-218ENST00000540430 EFCAB9A8MZ26 197 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 CCRL2O00421 344 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 B4GALT5O43286 388 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 SNX2O60749 519 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 MED26O95402 600 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 GLUD1P00367 558 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 ANXA6P08133 673 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 NFICP08651 508 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 CXCL8P10145 99 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 GLULP15104 373 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 BDNFP23560 247 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 LSM3P62310 102 aaKnown RBP9.17□□□□□ -0.94
LDHA-218ENST00000540430 HERVK_113P63132 956 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 POU6F1Q14863 301 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 VARS2Q5ST30 1063 aaKnown RBP9.17□□□□□ -0.94
LDHA-218ENST00000540430 ATF7IP2Q5U623 682 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 TAS1R1Q7RTX1 841 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 VN1R5Q7Z5H4 357 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 AMER2Q8N7J2 671 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 BEND7Q8N7W2 519 aaPredicted RBP9.17□□□□□ -0.94
LDHA-218ENST00000540430 JPH3Q8WXH2 748 aaPredicted RBP9.17□□□□□ -0.94
LDHA-218ENST00000540430 CCDC115Q96NT0 180 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 ERVK-6Q9BXR3 956 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 GON7Q9BXV9 100 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 B3GNT5Q9BYG0 378 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 DCSTAMPQ9H295 470 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 PRMT7Q9NVM4 692 aaPredicted RBP9.17□□□□□ -0.94
LDHA-218ENST00000540430 SCN3BQ9NY72 215 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 ERVW-1Q9UQF0 538 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 WDR87Q6ZQQ6 2873 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 VPS13AQ96RL7 3174 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 MYO15AQ9UKN7 3530 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 PTPRZ1P23471 2315 aaPredicted RBP9.17□□□□□ -0.94
LDHA-218ENST00000540430 ASPDHA6ND91 283 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 GALR2O43603 387 aaPredicted RBP9.17□□□□□ -0.94
LDHA-218ENST00000540430 MT-CO1P00395 513 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 CYP11A1P05108 521 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 PAMP19021 973 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 ALDH4A1P30038 563 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 FOXD4Q12950 439 aaPredicted RBP9.17□□□□□ -0.94
LDHA-218ENST00000540430 CTBP1Q13363 440 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 GALNT3Q14435 633 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 SMU1Q2TAY7 513 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 SLC25A52Q3SY17 297 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 YIF1BQ5BJH7 314 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 COLEC12Q5KU26 742 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 TPRG1LQ5T0D9 272 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 KANK2Q63ZY3 851 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 NEK5Q6P3R8 708 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 HID1Q8IV36 788 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 PARP16Q8N5Y8 322 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 DPP10Q8N608 796 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 C12orf29Q8N999 325 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 OR52E4Q8NGH9 312 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 SETD6Q8TBK2 473 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 TWIST2Q8WVJ9 160 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 POP5Q969H6 163 aaKnown RBP9.17□□□□□ -0.94
LDHA-218ENST00000540430 PHF21BQ96EK2 531 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 ST6GAL2Q96JF0 529 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 RPL10LQ96L21 214 aaKnown RBP9.17□□□□□ -0.94
LDHA-218ENST00000540430 COQ7Q99807 217 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 CCDC32Q9BV29 185 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 GORASP2Q9H8Y8 452 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 C12orf4Q9NQ89 552 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.17□□□□□ -0.943e-11■■□□□ 12.3
LDHA-218ENST00000540430 CCDC59Q9P031 241 aaKnown RBP9.17□□□□□ -0.94
LDHA-218ENST00000540430 UBA2Q9UBT2 640 aaPredicted RBP9.17□□□□□ -0.94
LDHA-218ENST00000540430 ORC6Q9Y5N6 252 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 MAGED1Q9Y5V3 778 aaPredicted RBP9.17□□□□□ -0.94
LDHA-218ENST00000540430 PLXNA3P51805 1871 aa9.17□□□□□ -0.94
LDHA-218ENST00000540430 MTCL1Q9Y4B5 1905 aaKnown RBP9.16□□□□□ -0.94
LDHA-218ENST00000540430 PRMT5O14744 637 aaPredicted RBP9.16□□□□□ -0.94
LDHA-218ENST00000540430 AZIN1O14977 448 aa9.16□□□□□ -0.94
LDHA-218ENST00000540430 PIP5K1BO14986 540 aa9.16□□□□□ -0.94
LDHA-218ENST00000540430 CAPN5O15484 640 aaPredicted RBP9.16□□□□□ -0.94
LDHA-218ENST00000540430 CACNG3O60359 315 aa9.16□□□□□ -0.94
LDHA-218ENST00000540430 TSPAN9O75954 239 aa9.16□□□□□ -0.94
LDHA-218ENST00000540430 PAPLNO95428 1278 aa9.16□□□□□ -0.94
LDHA-218ENST00000540430 YES1P07947 543 aa9.16□□□□□ -0.94
LDHA-218ENST00000540430 PRR35P0CG20 571 aa9.16□□□□□ -0.94
LDHA-218ENST00000540430 HGFP14210 728 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms