RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 GRM3Q14832 879 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 ZNF79Q15937 498 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 CHPFQ8IZ52 775 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 GPRASP2Q96D09 838 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 TRMT61AQ96FX7 289 aaKnown RBP12.18□□□□□ -0.46
USP3-203ENST00000538686 C8orf37Q96NL8 207 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 GPR78Q96P69 363 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 AGAP2Q99490 1192 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 NPAS1Q99742 590 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 APOL5Q9BWW9 433 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 CEP41Q9BYV8 373 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 TNKS2Q9H2K2 1166 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 AKTIPQ9H8T0 292 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 FOLH1BQ9HBA9 442 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 KMT5AQ9NQR1 393 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 KCNH7Q9NS40 1196 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 ANKEF1Q9NU02 776 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 MCUBQ9NWR8 336 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 SMPD4Q9NXE4 827 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 CYB5R1Q9UHQ9 305 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 RNF112Q9ULX5 631 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 RNF215Q9Y6U7 377 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 A0A0A6YYJ9 748 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 MDM4O15151 490 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 KIAA0513O60268 411 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 HCN1O60741 890 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 USP2O75604 605 aaPredicted RBP12.17□□□□□ -0.46
USP3-203ENST00000538686 LBPP18428 481 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 CHRNA5P30532 468 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 RPL35P42766 123 aaKnown RBP12.17□□□□□ -0.46
USP3-203ENST00000538686 RAB13P51153 203 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 CLDN20P56880 219 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 NFIAQ12857 509 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 ADAM15Q13444 863 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 EXOSC2Q13868 293 aaKnown RBP12.17□□□□□ -0.46
USP3-203ENST00000538686 LARS2Q15031 903 aaKnown RBP12.17□□□□□ -0.46
USP3-203ENST00000538686 GPR158Q5T848 1215 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 MLIPQ5VWP3 458 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 ARHGAP17Q68EM7 881 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 BICRALQ6AI39 1079 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 MACC1Q6ZN28 852 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 AHSA2Q719I0 299 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 CYP4Z2PQ8N1L4 340 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 FRS2Q8WU20 508 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 TBC1D20Q96BZ9 403 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 SLC47A1Q96FL8 570 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 TBATAQ96M53 351 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 NECTIN4Q96NY8 510 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 RAD9AQ99638 391 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 KCNS3Q9BQ31 491 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 ADPGKQ9BRR6 497 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 NTPCRQ9BSD7 190 aaKnown RBP12.17□□□□□ -0.46
USP3-203ENST00000538686 COPS4Q9BT78 406 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 HEXA-AS1Q9H8Q6 139 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 SLC52A3Q9NQ40 469 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 RBFOX1Q9NWB1 397 aaKnown RBP12.17□□□□□ -0.46
USP3-203ENST00000538686 ERAP1Q9NZ08 941 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 REV1Q9UBZ9 1251 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 RGS17Q9UGC6 210 aaPredicted RBP12.17□□□□□ -0.46
USP3-203ENST00000538686 ZFR2Q9UPR6 939 aaKnown RBP12.17□□□□□ -0.46
USP3-203ENST00000538686 KCNK7Q9Y2U2 307 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 TRAV20A0A0B4J274 112 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 ZCWPW2A0A1B0GU75 182 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 ACSM4P0C7M7 580 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 PDGFRAP16234 1089 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 HLA-FP30511 346 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 RGS6P49758 472 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 TKTL1P51854 596 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 HSPA2P54652 639 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 CSTF3Q12996 717 aaKnown RBP12.17□□□□□ -0.46
USP3-203ENST00000538686 BSPRYQ5W0U4 402 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 SAXO2Q658L1 398 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 DENND1BQ6P3S1 775 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 SHQ1Q6PI26 577 aaKnown RBP12.17□□□□□ -0.46
USP3-203ENST00000538686 KLHL17Q6TDP4 642 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 TRILQ7L0X0 811 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 SPATA19Q7Z5L4 167 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 ZSWIM9Q86XI8 627 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 DTWD1Q8N5C7 304 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 NLGN4YQ8NFZ3 816 aaPredicted RBP12.17□□□□□ -0.46
USP3-203ENST00000538686 ZNF675Q8TD23 568 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 MYLPFQ96A32 169 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 RPL10LQ96L21 214 aaKnown RBP12.17□□□□□ -0.46
USP3-203ENST00000538686 CHCHD6Q9BRQ6 235 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 HTATIP2Q9BUP3 242 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 ACTR8Q9H981 624 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 EMC7Q9NPA0 242 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 SDHAF3Q9NRP4 125 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 PLCXD1Q9NUJ7 323 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 TFCP2L1Q9NZI6 479 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 TRPM5Q9NZQ8 1165 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 PRKAG2Q9UGJ0 569 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 STUB1Q9UNE7 303 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 ABCG2Q9UNQ0 655 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 CMAHPQ9Y471 501 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 KCNMB2Q9Y691 235 aa12.17□□□□□ -0.46
USP3-203ENST00000538686 SBF2Q86WG5 1849 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 A0A1W2PPL8 197 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 CD3EAPO15446 510 aaKnown RBP12.16□□□□□ -0.46
USP3-203ENST00000538686 PMPCBO75439 489 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms