RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 PFKLP17858 780 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 IGFBP5P24593 272 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 TIE1P35590 1138 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 SMN1Q16637 294 aaKnown RBP17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 ARMC4Q5T2S8 1044 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 TIGD3Q6B0B8 471 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 ARHGAP36Q6ZRI8 547 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 SLC46A3Q7Z3Q1 461 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 OR10T2Q8NGX3 314 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 SH3KBP1Q96B97 665 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 NSUN5Q96P11 429 aaKnown RBP17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 ACOX2Q99424 681 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 ULBP1Q9BZM6 244 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 UCK2Q9BZX2 261 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 WDCPQ9H6R7 721 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 NIPAL2Q9H841 368 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 GLTPQ9NZD2 209 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 ZMAT5Q9UDW3 170 aaKnown RBP17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 UTS2RQ9UKP6 389 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 TMPRSS11EQ9UL52 423 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 NEU3Q9UQ49 428 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 PKP3Q9Y446 797 aa17.48■□□□□ 0.39
POLR2J3-209ENST00000504157 OR6C70A6NIJ9 312 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 YJEFN3A6XGL0 299 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 VTNP04004 478 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 ACADMP11310 421 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 CYP2A6P11509 494 aaPredicted RBP17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 CA5AP35218 305 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 GNPDA1P46926 289 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 PPP1R8Q12972 351 aaKnown RBP17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 PRKG2Q13237 762 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 MAD2L1BPQ15013 274 aaPredicted RBP17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 OR4D1Q15615 310 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 RAP1GAP2Q684P5 730 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 FAM171BQ6P995 826 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 SAMD7Q7Z3H4 446 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 SYVN1Q86TM6 617 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 AMIGO1Q86WK6 493 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 CCDC120Q96HB5 630 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 METTL2AQ96IZ6 378 aaKnown RBP17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 PPP1R16BQ96T49 567 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 TRAF4Q9BUZ4 470 aaPredicted RBP17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 LIN7BQ9HAP6 207 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 TEKT2Q9UIF3 430 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 SNX10Q9Y5X0 201 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 SLC9A3R1O14745 358 aaPredicted RBP17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 GABRDO14764 452 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 PMPCBO75439 489 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 PDGFAP04085 211 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 ALPPP05187 535 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 HLA-DQB2P05538 268 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 ZNF30P17039 623 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 KRT20P35900 424 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 MLLT6P55198 1093 aaPredicted RBP17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 MTPNP58546 118 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 CD83Q01151 205 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 SIM2Q14190 667 aaPredicted RBP17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 IRF3Q14653 427 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 PFKFB4Q16877 469 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 KDELC1Q6UW63 502 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 PIM3Q86V86 326 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 OR52K2Q8NGK3 314 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 POP5Q969H6 163 aaKnown RBP17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 ZNF583Q96ND8 569 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 C1QTNF3Q9BXJ4 246 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 TKTL2Q9H0I9 626 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 RGS18Q9NS28 235 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 LIMD1Q9UGP4 676 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 GJD2Q9UKL4 321 aa17.47■□□□□ 0.39
POLR2J3-209ENST00000504157 EVPLQ92817 2033 aa17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 LRRC14BA6NHZ5 514 aa17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 DFFAO00273 331 aa17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 RPS17P08708 135 aaKnown RBP17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 UROSP10746 265 aa17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 PRKACAP17612 351 aa17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 ZNF280AP59817 542 aaPredicted RBP17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 TIGD6Q17RP2 521 aa17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 NBPF12Q5TAG4 269 aaPredicted RBP17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 CYP4Z1Q86W10 505 aa17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 CHPFQ8IZ52 775 aa17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 PROKR1Q8TCW9 393 aa17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 NCLNQ969V3 563 aa17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 TRNT1Q96Q11 434 aaKnown RBP17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 ZSCAN5AQ9BUG6 496 aa17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 ADGRE2Q9UHX3 823 aa17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 TRMT6Q9UJA5 497 aaKnown RBP17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 KLHL21Q9UJP4 597 aa17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 IPPQ9Y573 584 aa17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 GMPPBQ9Y5P6 360 aa17.46■□□□□ 0.39
POLR2J3-209ENST00000504157 MROH6A6NGR9 719 aa17.45■□□□□ 0.38
POLR2J3-209ENST00000504157 CLDN5O00501 218 aa17.45■□□□□ 0.38
POLR2J3-209ENST00000504157 CRCPO75575 148 aa17.45■□□□□ 0.38
POLR2J3-209ENST00000504157 EPN2O95208 641 aa17.45■□□□□ 0.38
POLR2J3-209ENST00000504157 IFI30P13284 250 aa17.45■□□□□ 0.38
POLR2J3-209ENST00000504157 GRK5P34947 590 aa17.45■□□□□ 0.38
POLR2J3-209ENST00000504157 HTR7P34969 479 aa17.45■□□□□ 0.38
POLR2J3-209ENST00000504157 SOX6P35712 828 aa17.45■□□□□ 0.38
POLR2J3-209ENST00000504157 TBCEQ15813 527 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms