RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 KLRB1Q12918 225 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 KIR2DS3Q14952 304 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 SIX1Q15475 284 aaPredicted RBP11.55□□□□□ -0.56
MED28-203ENST00000503945 LRRC8BQ6P9F7 803 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 CDHR3Q6ZTQ4 885 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 ASB18Q6ZVZ8 466 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 LDB1Q86U70 411 aaPredicted RBP11.55□□□□□ -0.56
MED28-203ENST00000503945 SLC22A15Q8IZD6 547 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 FAM26EQ8N5C1 309 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 MIB2Q96AX9 1013 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 SLC22A18Q96BI1 424 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 PANX3Q96QZ0 392 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 RUFY1Q96T51 708 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 CHRNA10Q9GZZ6 450 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 ACSS2Q9NR19 701 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.55□□□□□ -0.56
MED28-203ENST00000503945 TCFL5Q9UL49 500 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 TP53TG5Q9Y2B4 290 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 LRRK2Q5S007 2527 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 USP9YO00507 2555 aaPredicted RBP11.54□□□□□ -0.56
MED28-203ENST00000503945 MAGEB16A2A368 324 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 BLACEA4D250 179 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 VAPBO95292 243 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 TPBGLP0DKB5 382 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 CD9P21926 228 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 AOAHP28039 575 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 NMBRP28336 390 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 RORAP35398 523 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 RAB28P51157 221 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 MLLT10P55197 1068 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 CRADDP78560 199 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 SEMA3AQ14563 771 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 TMED2Q15363 201 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 KYNUQ16719 465 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 MLIPQ5VWP3 458 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 LCN10Q6JVE6 187 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 MRNIPQ6NTE8 343 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 TLDC1Q6P9B6 456 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 OTOAQ7RTW8 1153 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 LRRC6Q86X45 466 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 SYTL1Q8IYJ3 562 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 MPP5Q8N3R9 675 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 OTUD6BQ8N6M0 293 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 ENDOVQ8N8Q3 282 aaKnown RBP11.54□□□□□ -0.56
MED28-203ENST00000503945 C19orf47Q8N9M1 422 aaKnown RBP11.54□□□□□ -0.56
MED28-203ENST00000503945 SKA2Q8WVK7 121 aaPredicted RBP11.54□□□□□ -0.56
MED28-203ENST00000503945 C17orf62Q9BQA9 187 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 KIFC1Q9BW19 673 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 SPRTNQ9H040 489 aaPredicted RBP11.54□□□□□ -0.56
MED28-203ENST00000503945 ING2Q9H160 280 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 FAM60AQ9NP50 221 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 TREX1Q9NSU2 369 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 PCMTD2Q9NV79 361 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 IRAK4Q9NWZ3 460 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 SPHK1Q9NYA1 384 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 GPN3Q9UHW5 284 aaPredicted RBP11.54□□□□□ -0.56
MED28-203ENST00000503945 SLC39A10Q9ULF5 831 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 MRFAP1Q9Y605 127 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 ICE1Q9Y2F5 2266 aa11.54□□□□□ -0.56
MED28-203ENST00000503945 A0A0J9YY10 115 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 ARGFXA6NJG6 315 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 C9J4A7 227 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 ALAS2P22557 587 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 CD97P48960 835 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 DCDP81605 110 aaKnown RBP11.53□□□□□ -0.56
MED28-203ENST00000503945 SF1Q15637 639 aaKnown RBP11.53□□□□□ -0.56
MED28-203ENST00000503945 TRIP13Q15645 432 aaPredicted RBP11.53□□□□□ -0.56
MED28-203ENST00000503945 SLC5A12Q1EHB4 618 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 C4orf17Q53FE4 359 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 ZNF789Q5FWF6 425 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 UNC5DQ6UXZ4 953 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 TRIM73Q86UV7 250 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 VRK3Q8IV63 474 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 KRT222Q8N1A0 295 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 DNAJC22Q8N4W6 341 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 RAB42Q8N4Z0 105 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 MAGEC3Q8TD91 643 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 DENND1AQ8TEH3 1009 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 RAD51AP1Q96B01 352 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 FOPNLQ96NB1 174 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 TCF12Q99081 682 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 DHRS4Q9BTZ2 278 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 SLC25A23Q9BV35 468 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 INTS7Q9NVH2 962 aaKnown RBP11.53□□□□□ -0.56
MED28-203ENST00000503945 MARCH4Q9P2E8 410 aaPredicted RBP11.53□□□□□ -0.56
MED28-203ENST00000503945 GNPTGQ9UJJ9 305 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 TTC7AQ9ULT0 858 aaPredicted RBP11.53□□□□□ -0.56
MED28-203ENST00000503945 PLAGL1Q9UM63 463 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 G3BP2Q9UN86 482 aaKnown RBP11.53□□□□□ -0.56
MED28-203ENST00000503945 PLCL2Q9UPR0 1127 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 CDYLQ9Y232 598 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 PADI2Q9Y2J8 665 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 PPP2R2CQ9Y2T4 447 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 JRKLQ9Y4A0 524 aa11.53□□□□□ -0.56
MED28-203ENST00000503945 MED13Q9UHV7 2174 aa11.52□□□□□ -0.56
MED28-203ENST00000503945 SDR42E2A6NKP2 422 aa11.52□□□□□ -0.57
MED28-203ENST00000503945 DNAJB5O75953 348 aa11.52□□□□□ -0.57
MED28-203ENST00000503945 TMEM63AO94886 807 aa11.52□□□□□ -0.57
MED28-203ENST00000503945 PAMP19021 973 aa11.52□□□□□ -0.57
MED28-203ENST00000503945 TPSB2P20231 275 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms