RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 DEXIO95424 95 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 RFC2P35250 354 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 GNL1P36915 607 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-218ENST00000493430 MRPL12P52815 198 aaKnown RBP3.05□□□□□ -1.92
PTCD3-218ENST00000493430 VCPP55072 806 aaKnown RBP3.05□□□□□ -1.92
PTCD3-218ENST00000493430 NTHL1P78549 312 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 AKAP17AQ02040 695 aaKnown RBP3.05□□□□□ -1.92
PTCD3-218ENST00000493430 EMC2Q15006 297 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 SPECC1Q5M775 1068 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 TRNP1Q6NT89 227 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 ARHGAP11AQ6P4F7 1023 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 PRSS55Q6UWB4 352 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-218ENST00000493430 TMEM219Q86XT9 240 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 KRTAP7-1Q8IUC3 87 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 CHERPQ8IWX8 916 aaKnown RBP3.05□□□□□ -1.92
PTCD3-218ENST00000493430 DIS3L2Q8IYB7 885 aaKnown RBP3.05□□□□□ -1.92
PTCD3-218ENST00000493430 KIAA2013Q8IYS2 634 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 DSELQ8IZU8 1212 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 COLGALT1Q8NBJ5 622 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 SLC24A4Q8NFF2 622 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 BBS10Q8TAM1 723 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 SPPL3Q8TCT6 385 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 SLC20A1Q8WUM9 679 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 ZNF689Q96CS4 500 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-218ENST00000493430 RPGRIP1Q96KN7 1286 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 MBOAT7Q96N66 472 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 CASD1Q96PB1 797 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 TWNKQ96RR1 684 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 RAD9AQ99638 391 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 LZTS2Q9BRK4 669 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 FAM167BQ9BTA0 163 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 LRRC1Q9BTT6 524 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 TEKT3Q9BXF9 490 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 POLR3FQ9H1D9 316 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-218ENST00000493430 MTIF3Q9H2K0 278 aaKnown RBP3.05□□□□□ -1.92
PTCD3-218ENST00000493430 AZI2Q9H6S1 392 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 FKRPQ9H9S5 495 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 NOD2Q9HC29 1040 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 C6orf50Q9HD87 102 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 KCNMB3Q9NPA1 279 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 TMEM30AQ9NV96 361 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 MARCH5Q9NX47 278 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 RCOR1Q9UKL0 485 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 PIN4Q9Y237 131 aaKnown RBP3.05□□□□□ -1.92
PTCD3-218ENST00000493430 CARD8Q9Y2G2 431 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 COMMD10Q9Y6G5 202 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 XIRP2A4UGR9 3374 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 PTPRBP23467 1997 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 MUC22E2RYF6 1773 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-218ENST00000493430 COL1A2P08123 1366 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 STK36Q9NRP7 1315 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 DOCK4Q8N1I0 1966 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 SPTBN4Q9H254 2564 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 PABPN1LA6NDY0 278 aaKnown RBP3.04□□□□□ -1.92
PTCD3-218ENST00000493430 GOLGA6L9A6NEM1 432 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 CASTOR2A6NHX0 329 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 FAM90A7PA6NKC0 464 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 SH2D7A6NKC9 451 aaPredicted RBP3.04□□□□□ -1.92
PTCD3-218ENST00000493430 PMS2P5A8MQ11 134 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 FAM90A22PA8MWA6 464 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 FAM90A12PA8MX19 464 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 FAM90A23PA8MXZ1 464 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 B4DLN1 442 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 E9PMD0 336 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 PEX12O00623 359 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 DVL1O14640 695 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 HCRTO43612 131 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 KLK8O60259 260 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 TSPAN1O60635 241 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 MMP1P03956 469 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 TUBBP07437 444 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 DARSP14868 501 aaKnown RBP3.04□□□□□ -1.92
PTCD3-218ENST00000493430 GLRA2P23416 452 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 ALDH4A1P30038 563 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 KRT2P35908 639 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 SLC11A1P49279 550 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 CLCNKAP51800 687 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 TERF1P54274 439 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 DVL1P1P54792 670 aaPredicted RBP3.04□□□□□ -1.92
PTCD3-218ENST00000493430 EVCP57679 992 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 CLDN2P57739 230 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 OSTNP61366 133 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 TUBB4BP68371 445 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 MRPS5P82675 430 aaKnown RBP3.04□□□□□ -1.92
PTCD3-218ENST00000493430 TBL3Q12788 808 aaKnown RBP3.04□□□□□ -1.92
PTCD3-218ENST00000493430 KRT32Q14532 448 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 DHX8Q14562 1220 aaKnown RBP3.04□□□□□ -1.92
PTCD3-218ENST00000493430 NAA25Q14CX7 972 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 NONOQ15233 471 aaKnown RBP eCLIP3.04□□□□□ -1.92
PTCD3-218ENST00000493430 MMEL1Q495T6 779 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 RARS2Q5T160 578 aaKnown RBP3.04□□□□□ -1.92
PTCD3-218ENST00000493430 PDSS1Q5T2R2 415 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 SYCP2LQ5T4T6 812 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 TWF2Q6IBS0 349 aaKnown RBP3.04□□□□□ -1.92
PTCD3-218ENST00000493430 ECHDC2Q86YB7 292 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 THNSL1Q8IYQ7 743 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 RNF113BQ8IZP6 322 aaKnown RBP3.04□□□□□ -1.92
PTCD3-218ENST00000493430 SAMD3Q8N6K7 520 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 CCDC148Q8NFR7 591 aa3.04□□□□□ -1.92
PTCD3-218ENST00000493430 ABTB1Q969K4 478 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms