RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 CSF3RQ99062 836 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 DPH2Q9BQC3 489 aaPredicted RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 FAM126AQ9BYI3 521 aaPredicted RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 CD244Q9BZW8 370 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 CD320Q9NPF0 282 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 TIMMDC1Q9NPL8 285 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 ARL15Q9NXU5 204 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 TUBA8Q9NY65 449 aaPredicted RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 STOML2Q9UJZ1 356 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 G3V2T6 193 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 TRBC1P01850 177 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 ALPLP05186 524 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 CKMP06732 381 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 C7P10643 843 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 BCKDHAP12694 445 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 ACRV1P26436 265 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 CCR7P32248 378 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 TPD52P55327 224 aaPredicted RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 CHRNB3Q05901 458 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 FPGSQ05932 587 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 LMAN2Q12907 356 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 CRY1Q16526 586 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 GPRC6AQ5T6X5 926 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 LRRC66Q68CR7 880 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 CERS6Q6ZMG9 384 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 PIWIL3Q7Z3Z3 882 aaKnown RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 SNX20Q7Z614 316 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 LILRA3Q8N6C8 439 aaPredicted RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 ZNF366Q8N895 744 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 OSCP1Q8WVF1 389 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 SCAMP4Q969E2 229 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 VOPP1Q96AW1 172 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 SLC47A1Q96FL8 570 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 APIPQ96GX9 242 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 IGSF21Q96ID5 467 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 MBOAT4Q96T53 435 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 CCDC90BQ9GZT6 254 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 LHPPQ9H008 270 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 PAIP1Q9H074 479 aaKnown RBP12.39□□□□□ -0.43
CLIC4-202ENST00000488683 ACTR8Q9H981 624 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 GNPTGQ9UJJ9 305 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 BACE2Q9Y5Z0 518 aa12.39□□□□□ -0.43
CLIC4-202ENST00000488683 MICAL3Q7RTP6 2002 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 GFRA2O00451 464 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 LHCGRP22888 699 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 RPS3P23396 243 aaKnown RBP eCLIP12.38□□□□□ -0.43
CLIC4-202ENST00000488683 DCTN2Q13561 401 aaKnown RBP12.38□□□□□ -0.43
CLIC4-202ENST00000488683 TBC1D25Q3MII6 688 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 RBFAQ8N0V3 343 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 ZNF548Q8NEK5 533 aaPredicted RBP12.38□□□□□ -0.43
CLIC4-202ENST00000488683 SORCS1Q8WY21 1168 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 UBE2FQ969M7 185 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 BDH2Q9BUT1 245 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 ZDHHC6Q9H6R6 413 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 LRTM1Q9HBL6 345 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 SLCO3A1Q9UIG8 710 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 PPT2Q9UMR5 302 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 ERVK-11Q9UQG0 969 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 CCL26Q9Y258 94 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 TMEM202A6NGA9 273 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 hCG_2039718K7EN88 272 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 MANBAO00462 879 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 CXCR6O00574 342 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 TOR1BO14657 336 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 ZNF682O95780 498 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 THRBP10828 461 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 WEE1P30291 646 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 COL9A2Q14055 689 aaPredicted RBP12.38□□□□□ -0.43
CLIC4-202ENST00000488683 SIM2Q14190 667 aaPredicted RBP12.38□□□□□ -0.43
CLIC4-202ENST00000488683 CRTC1Q6UUV9 634 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 ZNF783Q6ZMS7 281 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 SNX19Q92543 992 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 SDCCAG3Q96C92 435 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 CFAP97Q9P2B7 532 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 SLC22A14Q9Y267 594 aa12.38□□□□□ -0.43
CLIC4-202ENST00000488683 TRBV5-4A0A0C4DH59 114 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 GRXCR2A6NFK2 248 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 HTR1AP08908 422 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 RAP2AP10114 183 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 GABRR2P28476 465 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 EPHA2P29317 976 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 RPIAP49247 311 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 VAC14Q08AM6 782 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 KCNAB2Q13303 367 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 BFSP2Q13515 415 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 DAG1Q14118 895 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 MYBPC3Q14896 1274 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 PON2Q15165 354 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 FAM98BQ52LJ0 330 aaKnown RBP12.37□□□□□ -0.43
CLIC4-202ENST00000488683 OR4F3Q6IEY1 312 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 LAIR2Q6ISS4 152 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 BTLAQ7Z6A9 289 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 DCAF4L2Q8NA75 395 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 HJURPQ8NCD3 748 aaPredicted RBP12.37□□□□□ -0.43
CLIC4-202ENST00000488683 CHST14Q8NCH0 376 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 OR8J3Q8NGG0 315 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 THAP11Q96EK4 314 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 APOLD1Q96LR9 279 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 PPP3R2Q96LZ3 170 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 ABCB8Q9NUT2 735 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms