RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 CAPNS2Q96L46 248 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 PARK7Q99497 189 aaKnown RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 MOV10L1Q9BXT6 1211 aaKnown RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 CPVLQ9H3G5 476 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 HINT3Q9NQE9 182 aaKnown RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 TMEM30AQ9NV96 361 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 AASSQ9UDR5 926 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 CCPG1Q9ULG6 757 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 MMP24Q9Y5R2 645 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 COL11A1P12107 1806 aaPredicted RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 PARP14Q460N5 1801 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 FAM237AA0A1B0GTK4 181 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 VPS37CA5D8V6 355 aaPredicted RBP3.87□□□□□ -1.79
UBR3-209ENST00000477461 PMS2P5A8MQ11 134 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 AKR1B15C9JRZ8 316 aaPredicted RBP3.87□□□□□ -1.79
UBR3-209ENST00000477461 PDHXO00330 501 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 SCAMP1O15126 338 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 CYTH3O43739 400 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 IPO7O95373 1038 aaKnown RBP3.87□□□□□ -1.79
UBR3-209ENST00000477461 CTDNEP1O95476 244 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 FTCDO95954 541 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 ICAM1P05362 532 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 SPARCP09486 303 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 TNFAIP3P21580 790 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 CALML3P27482 149 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 GNA11P29992 359 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 CORO1AP31146 461 aaKnown RBP3.87□□□□□ -1.79
UBR3-209ENST00000477461 COPB2P35606 906 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 SNAP25P60880 206 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 CCNA1P78396 465 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 NUCB2P80303 420 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 ZBED6P86452 979 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 NIPAL4Q0D2K0 466 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 NAE1Q13564 534 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 FCN2Q15485 313 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 ADIPOQQ15848 244 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 QRICH1Q2TAL8 776 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 WDR78Q5VTH9 848 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 SNRNP48Q6IEG0 339 aaKnown RBP3.87□□□□□ -1.79
UBR3-209ENST00000477461 NCEH1Q6PIU2 408 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 PQLC2Q6ZP29 291 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 MAATS1Q7Z4T9 603 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 PXKQ7Z7A4 578 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 CPLX4Q7Z7G2 160 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 ARHGAP12Q8IWW6 846 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 RNF113BQ8IZP6 322 aaKnown RBP3.87□□□□□ -1.79
UBR3-209ENST00000477461 OR2AK2Q8NG84 335 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 HMGCLL1Q8TB92 370 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 ARHGEF2Q92974 986 aaKnown RBP3.87□□□□□ -1.79
UBR3-209ENST00000477461 SMARCE1Q969G3 411 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 MMABQ96EY8 250 aaPredicted RBP3.87□□□□□ -1.79
UBR3-209ENST00000477461 PERPQ96FX8 193 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 PPP1R13BQ96KQ4 1090 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 F2RL3Q96RI0 385 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 MTERF1Q99551 399 aaKnown RBP3.87□□□□□ -1.79
UBR3-209ENST00000477461 POLR3CQ9BUI4 534 aaPredicted RBP3.87□□□□□ -1.79
UBR3-209ENST00000477461 BARHL1Q9BZE3 327 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 GLT8D2Q9H1C3 349 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 NDST4Q9H3R1 872 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 RAVER2Q9HCJ3 691 aaKnown RBP3.87□□□□□ -1.79
UBR3-209ENST00000477461 C6orf50Q9HD87 102 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 ZCCHC17Q9NP64 241 aaKnown RBP3.87□□□□□ -1.79
UBR3-209ENST00000477461 MMP25Q9NPA2 562 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 SH3GLB2Q9NR46 395 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 EHD2Q9NZN4 543 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 VPS54Q9P1Q0 977 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 LIMA1Q9UHB6 759 aaKnown RBP3.87□□□□□ -1.79
UBR3-209ENST00000477461 MRPL11Q9Y3B7 192 aaKnown RBP3.87□□□□□ -1.79
UBR3-209ENST00000477461 OR2W1Q9Y3N9 320 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 RABGAP1Q9Y3P9 1069 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 KCNE2Q9Y6J6 123 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 ABCB11O95342 1321 aa3.87□□□□□ -1.79
UBR3-209ENST00000477461 RLFQ13129 1914 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 SMCO2A6NFE2 343 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 PGPEP1LA6NFU8 196 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 LIPT2A6NK58 231 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 ATP2A1O14983 1001 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 STX6O43752 255 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 DAB1O75553 588 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 SLC25A27O95847 323 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 EIF2S1P05198 315 aaKnown RBP3.86□□□□□ -1.79
UBR3-209ENST00000477461 POLR2MP0CAP2 368 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 FDPSP14324 419 aaKnown RBP3.86□□□□□ -1.79
UBR3-209ENST00000477461 CAPN3P20807 821 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 RRM1P23921 792 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 BDKRB2P30411 391 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 KRT2P35908 639 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 MAP2K2P36507 400 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 CLCNKAP51800 687 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 MRPL12P52815 198 aaKnown RBP3.86□□□□□ -1.79
UBR3-209ENST00000477461 DRG2P55039 364 aaKnown RBP3.86□□□□□ -1.79
UBR3-209ENST00000477461 C1QTNF8P60827 252 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 DCAF7P61962 342 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 TMEM30BQ3MIR4 351 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 PDSS1Q5T2R2 415 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 GALNT17Q6IS24 598 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 TSSK4Q6SA08 328 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 SARM1Q6SZW1 724 aa3.86□□□□□ -1.79
UBR3-209ENST00000477461 CACNA2D4Q7Z3S7 1137 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms