RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 ALPPP05187 535 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 CCNFP41002 786 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 ARL13AQ5H913 290 aaPredicted RBP18.24■□□□□ 0.51
VARS2-209ENST00000477288 ZNF554Q86TJ5 538 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 GRHL3Q8TE85 626 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 PRICKLE1Q96MT3 831 aaPredicted RBP18.24■□□□□ 0.51
VARS2-209ENST00000477288 OSBPL2Q9H1P3 480 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 ITGB1BP2Q9UKP3 347 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 BAIAP2Q9UQB8 552 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 PIP5K1BO14986 540 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 MYCLP1P12525 358 aaPredicted RBP18.24■□□□□ 0.51
VARS2-209ENST00000477288 NFATC2Q13469 925 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 GANABQ14697 944 aaKnown RBP18.24■□□□□ 0.51
VARS2-209ENST00000477288 TNFAIP8L2Q6P589 184 aaPredicted RBP18.24■□□□□ 0.51
VARS2-209ENST00000477288 CYP2U1Q7Z449 544 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 UFD1Q92890 307 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 LPIN3Q9BQK8 851 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 SYT17Q9BSW7 474 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 PCDHGC3Q9UN70 934 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 CLCA3PQ9Y6N3 262 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 A8MU76 341 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 NOBOXO60393 691 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 ATP5A1P25705 553 aaKnown RBP18.24■□□□□ 0.51
VARS2-209ENST00000477288 PTGER3P43115 390 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 TARDBPQ13148 414 aaKnown RBP eCLIP18.24■□□□□ 0.51
VARS2-209ENST00000477288 RIN1Q13671 783 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 CBR4Q8N4T8 237 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 ZNF548Q8NEK5 533 aaPredicted RBP18.24■□□□□ 0.51
VARS2-209ENST00000477288 WFIKKN2Q8TEU8 576 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 YIPF4Q9BSR8 244 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 ATXN10Q9UBB4 475 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 FBXW11Q9UKB1 542 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 HSD3B2P26439 372 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 LIMK2P53671 638 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 DAOAP59103 153 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 SCN1BQ07699 218 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 ZNF280BQ86YH2 543 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 MMAAQ8IVH4 418 aaKnown RBP18.24■□□□□ 0.51
VARS2-209ENST00000477288 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.24■□□□□ 0.51
VARS2-209ENST00000477288 RBM15BQ8NDT2 890 aaKnown RBP18.24■□□□□ 0.51
VARS2-209ENST00000477288 RAB11FIP5Q9BXF6 653 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 TOR3AQ9H497 397 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 NR2E1Q9Y466 385 aa18.24■□□□□ 0.51
VARS2-209ENST00000477288 EIPR1Q53HC9 387 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 FRMD7Q6ZUT3 714 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 NLGN2Q8NFZ4 835 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 GORASP1Q9BQQ3 440 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 DAPL1A0PJW8 107 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 SOWAHBA6NEL2 793 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 ZNF726A6NNF4 738 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 PITPNM1O00562 1244 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 CD2P06729 351 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 FUT2Q10981 343 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 SLC1A5Q15758 541 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 INAVAQ3KP66 663 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 TESCQ96BS2 214 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 CYP2S1Q96SQ9 504 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 ADAP2Q9NPF8 381 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 NOX1Q9Y5S8 564 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 CPNE3O75131 537 aaKnown RBP18.23■□□□□ 0.51
VARS2-209ENST00000477288 ESR1P03372 595 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 OGFOD2Q6N063 350 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 HFE2Q6ZVN8 426 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 CCDC80Q76M96 950 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 SYVN1Q86TM6 617 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 P2RY8Q86VZ1 359 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 NSMCE3Q96MG7 304 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 SDCBP2Q9H190 292 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 ELOA3DA6NLF2 546 aaPredicted RBP18.23■□□□□ 0.51
VARS2-209ENST00000477288 CXCR6O00574 342 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 PDCD5O14737 125 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 ELOA3BQ3SY89 546 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 IFI44LQ53G44 452 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 ABHD13Q7L211 337 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 ECHDC2Q86YB7 292 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 NAXEQ8NCW5 288 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 ELOA3Q8NG57 546 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 SLC39A3Q9BRY0 314 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 MUC13Q9H3R2 512 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.23■□□□□ 0.51
VARS2-209ENST00000477288 TRMUO75648 421 aaKnown RBP18.23■□□□□ 0.51
VARS2-209ENST00000477288 ARCN1P48444 511 aaKnown RBP18.23■□□□□ 0.51
VARS2-209ENST00000477288 PCDHGA11Q9Y5H2 935 aa18.23■□□□□ 0.51
VARS2-209ENST00000477288 FOXO6A8MYZ6 492 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 L7N2F9 121 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 PI15O43692 258 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 TNFP01375 233 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 VAMP2P63027 116 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 PITRM1Q5JRX3 1037 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 SCAMP5Q8TAC9 235 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 CYB5D2Q8WUJ1 264 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 TBL1XR1Q9BZK7 514 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 SMURF2Q9HAU4 748 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 MRC1P22897 1456 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 SCELO95171 688 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 PRAMEF12O95522 483 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 ITGB1P05556 798 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 EIF2S3LQ2VIR3 472 aaKnown RBP18.22■□□□□ 0.51
VARS2-209ENST00000477288 MTERF1Q99551 399 aaKnown RBP18.22■□□□□ 0.51
VARS2-209ENST00000477288 TRMT61BQ9BVS5 477 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms