RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 TXNRD2Q9NNW7 524 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 CCDC177Q9NQR7 707 aaPredicted RBP7.78□□□□□ -1.16
TPM3-215ENST00000469717 TOR4AQ9NXH8 423 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.78□□□□□ -1.16
TPM3-215ENST00000469717 FAM234BA2RU67 622 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 PQBP1O60828 265 aaKnown RBP7.78□□□□□ -1.16
TPM3-215ENST00000469717 TMCC2O75069 709 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 ANXA9O76027 345 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 RECQL4O94761 1208 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 POLR2EP19388 210 aaKnown RBP7.78□□□□□ -1.16
TPM3-215ENST00000469717 RYKP34925 604 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 TOP3AQ13472 1001 aaPredicted RBP7.78□□□□□ -1.16
TPM3-215ENST00000469717 SLC14A2Q15849 920 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 FAM174BQ3ZCQ3 159 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 COQ5Q5HYK3 327 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 WSCD1Q658N2 575 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 PNCKQ6P2M8 343 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 PRSS48Q7RTY5 328 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 RAB44Q7Z6P3 723 aaPredicted RBP7.78□□□□□ -1.16
TPM3-215ENST00000469717 TAC4Q86UU9 113 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.78□□□□□ -1.16
TPM3-215ENST00000469717 CRYBG2Q8N1P7 616 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 ESX1Q8N693 406 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 MED30Q96HR3 178 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 TRNT1Q96Q11 434 aaKnown RBP7.78□□□□□ -1.16
TPM3-215ENST00000469717 SNX18Q96RF0 628 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 BRINP2Q9C0B6 783 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 SLC6A14Q9UN76 642 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 TPRKBQ9Y3C4 175 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 PHIPQ8WWQ0 1821 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 CDK2AP1O14519 115 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 SLC16A6O15403 523 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 NTRK1P04629 796 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 RPL17P18621 184 aaKnown RBP7.78□□□□□ -1.16
TPM3-215ENST00000469717 S100A5P33763 92 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 CA5AP35218 305 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 CDKN1CP49918 316 aaPredicted RBP7.78□□□□□ -1.16
TPM3-215ENST00000469717 DGKEP52429 567 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 ERVK-8P63133 956 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 NR6A1Q15406 480 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 BAK1Q16611 211 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 XKR7Q5GH72 579 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 SPANXN4Q5MJ08 99 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 SPRYD7Q5W111 196 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 GPR153Q6NV75 609 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 IL27RAQ6UWB1 636 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 ZNF517Q6ZMY9 492 aaPredicted RBP7.78□□□□□ -1.16
TPM3-215ENST00000469717 LRRC8DQ7L1W4 858 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 VTCN1Q7Z7D3 282 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 GLCCI1Q86VQ1 547 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 APPL2Q8NEU8 664 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 ZMIZ2Q8NF64 920 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 BEST2Q8NFU1 509 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 OR5K1Q8NHB7 308 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 BLOC1S5Q8TDH9 187 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 APH1BQ8WW43 257 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 SNAPC3Q92966 411 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 TSPAN17Q96FV3 270 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 RNF170Q96K19 258 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 OR2A14Q96R47 310 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 VAT1Q99536 393 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 UGT2B28Q9BY64 529 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 SCN3BQ9NY72 215 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 USE1Q9NZ43 259 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 DNMT3LQ9UJW3 386 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 CDH9Q9ULB4 789 aa7.78□□□□□ -1.16
TPM3-215ENST00000469717 ARIH1Q9Y4X5 557 aaPredicted RBP7.78□□□□□ -1.16
TPM3-215ENST00000469717 NYNRINQ9P2P1 1898 aaKnown RBP7.78□□□□□ -1.16
TPM3-215ENST00000469717 GOLGA8CPA6NN73 597 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 LOC110117498-PIK3R3F6TDL0 507 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 H3BRB1 525 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 J3KR12 359 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 BTN3A1O00481 513 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 FFAR3O14843 346 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 GPR42O15529 346 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 RGS5O15539 181 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 GPR39O43194 453 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 TREHO43280 583 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 MTSS1O43312 755 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 CACNG3O60359 315 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 SLC15A1P46059 708 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 DAOAP59103 153 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 ERVPABLB-1P60509 514 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 NFKB2Q00653 900 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 SP3Q02447 781 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 NOGQ13253 232 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 SLC14A1Q13336 389 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 MAD2L1BPQ15013 274 aaPredicted RBP7.77□□□□□ -1.17
TPM3-215ENST00000469717 TIGD6Q17RP2 521 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 SETMARQ53H47 684 aaPredicted RBP7.77□□□□□ -1.17
TPM3-215ENST00000469717 ZNF484Q5JVG2 852 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 CPZQ66K79 652 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 ZNF544Q6NX49 715 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 C11orf96Q7Z7L8 435 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 GLRX5Q86SX6 157 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 UNC93AQ86WB7 457 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 TTC29Q8NA56 475 aaPredicted RBP7.77□□□□□ -1.17
TPM3-215ENST00000469717 FBLIM1Q8WUP2 373 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 SLC38A4Q969I6 547 aa7.77□□□□□ -1.17
TPM3-215ENST00000469717 PDLIM5Q96HC4 596 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms