RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 PLEKHM1Q9Y4G2 1056 aa4.13□□□□□ -1.75
SSR3-204ENST00000467733 FADS3Q9Y5Q0 445 aa4.13□□□□□ -1.75
SSR3-204ENST00000467733 MDC1Q14676 2089 aaKnown RBP4.13□□□□□ -1.75
SSR3-204ENST00000467733 FLNAP21333 2647 aaKnown RBP4.12□□□□□ -1.75
SSR3-204ENST00000467733 MYO7BQ6PIF6 2116 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 JMJD1CQ15652 2540 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 IGHV5-10-1A0A0J9YXX1 117 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 LOC101059948A0A1B0GTJ6 334 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 ARHGAP10A1A4S6 786 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 IGLON5A6NGN9 336 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 PRSS29PA6NIE9 313 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 LINC01548A6NM66 108 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 FAM227AF5H4B4 570 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 F5H5T6 163 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 RNF103O00237 685 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 SPTLC2O15270 562 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 PROM1O43490 865 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 TSPAN6O43657 245 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 NUDT21O43809 227 aaKnown RBP4.12□□□□□ -1.75
SSR3-204ENST00000467733 ONECUT2O95948 504 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 APOEP02649 317 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 CBSLP0DN79 551 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 PIM1P11309 404 aaPredicted RBP4.12□□□□□ -1.75
SSR3-204ENST00000467733 TCN2P20062 427 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 GJB2P29033 226 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 CBSP35520 551 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 PMS2P54278 862 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 RAD23BP54727 409 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 TUBA4AP68366 448 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 SSBP2P81877 361 aaPredicted RBP4.12□□□□□ -1.75
SSR3-204ENST00000467733 B4GALNT1Q00973 533 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 TRA2AQ13595 282 aaKnown RBP eCLIP4.12□□□□□ -1.75
SSR3-204ENST00000467733 ARHGEF7Q14155 803 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 HLTFQ14527 1009 aaKnown RBP eCLIP4.12□□□□□ -1.75
SSR3-204ENST00000467733 MLC1Q15049 377 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 ALG11Q2TAA5 492 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 EIF2S3LQ2VIR3 472 aaKnown RBP4.12□□□□□ -1.75
SSR3-204ENST00000467733 ANO6Q4KMQ2 910 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 C14orf28Q4W4Y0 310 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 MTX3Q5HYI7 312 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 RABGAP1LQ5R372 815 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 ATP1A1-AS1Q5TC04 95 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 RAP1GAP2Q684P5 730 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 PPP4R4Q6NUP7 873 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 C22orf39Q6P5X5 142 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 VWA1Q6PCB0 445 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 PIM3Q86V86 326 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 VPS36Q86VN1 386 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 GKN2Q86XP6 184 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 MCEMP1Q8IX19 187 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 RAVER1Q8IY67 606 aaKnown RBP4.12□□□□□ -1.75
SSR3-204ENST00000467733 MYO1HQ8N1T3 1032 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 SLC30A5Q8TAD4 765 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 PPP1R35Q8TAP8 253 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 GOLGA5Q8TBA6 731 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 BTN2A3PQ96KV6 586 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 ZSCAN31Q96LW9 406 aaPredicted RBP4.12□□□□□ -1.75
SSR3-204ENST00000467733 C5orf34Q96MH7 638 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 TEFMQ96QE5 360 aaKnown RBP4.12□□□□□ -1.75
SSR3-204ENST00000467733 PPP1R9BQ96SB3 815 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 PRMT1Q99873 361 aaKnown RBP4.12□□□□□ -1.75
SSR3-204ENST00000467733 NUDT22Q9BRQ3 303 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 FEM1AQ9BSK4 669 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 EDEM3Q9BZQ6 932 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 UNKQ9C0B0 810 aaKnown RBP4.12□□□□□ -1.75
SSR3-204ENST00000467733 TNMDQ9H2S6 317 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 CISHQ9NSE2 258 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 ETAA1Q9NY74 926 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 VSX1Q9NZR4 365 aaPredicted RBP4.12□□□□□ -1.75
SSR3-204ENST00000467733 HESX1Q9UBX0 185 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 IL36AQ9UHA7 158 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 XPO7Q9UIA9 1087 aaKnown RBP4.12□□□□□ -1.75
SSR3-204ENST00000467733 FBXO2Q9UK22 296 aaPredicted RBP4.12□□□□□ -1.75
SSR3-204ENST00000467733 VPS28Q9UK41 221 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 PILRAQ9UKJ1 303 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 TSPAN16Q9UKR8 245 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 DAAM1Q9Y4D1 1078 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 OR51B4Q9Y5P0 310 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 CSPG4Q6UVK1 2322 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 NBEAL1Q6ZS30 2694 aa4.12□□□□□ -1.75
SSR3-204ENST00000467733 B4DGG1 531 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 TCP11X1B4DZS4 312 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 B4E171 279 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 H3BQV1 296 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 EIF5BO60841 1220 aaKnown RBP4.11□□□□□ -1.75
SSR3-204ENST00000467733 TUSC2O75896 110 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 GRPP07492 148 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 THRAP10827 490 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 CTSEP14091 401 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 GATA3P23771 443 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 RRM1P23921 792 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 CSTF2P33240 577 aaKnown RBP eCLIP4.11□□□□□ -1.75
SSR3-204ENST00000467733 TSPAN7P41732 249 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 LEPRP48357 1165 aaKnown RBP4.11□□□□□ -1.75
SSR3-204ENST00000467733 PGDP52209 483 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 LIMK2P53671 638 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 NUCB2P80303 420 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 NR1D2Q14995 579 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 IRF4Q15306 451 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 INPP5JQ15735 1006 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms