RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 KIFC1Q9BW19 673 aa19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 ENAMQ9NRM1 1142 aa19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 SNX7Q9UNH6 387 aa19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 TDRKHQ9Y2W6 561 aaKnown RBP19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 CEACAM4O75871 244 aa19.82■□□□□ 0.76
PDLIM4-205ENST00000463615 APOA4P06727 396 aa19.82■□□□□ 0.76
PDLIM4-205ENST00000463615 PEBP1P30086 187 aaKnown RBP19.82■□□□□ 0.76
PDLIM4-205ENST00000463615 MAGEA6P43360 314 aa19.82■□□□□ 0.76
PDLIM4-205ENST00000463615 SESN2P58004 480 aaPredicted RBP19.82■□□□□ 0.76
PDLIM4-205ENST00000463615 HSPA14Q0VDF9 509 aa19.82■□□□□ 0.76
PDLIM4-205ENST00000463615 NCF4Q15080 339 aa19.82■□□□□ 0.76
PDLIM4-205ENST00000463615 RHBDD2Q6NTF9 364 aa19.82■□□□□ 0.76
PDLIM4-205ENST00000463615 LRRC8BQ6P9F7 803 aa19.82■□□□□ 0.76
PDLIM4-205ENST00000463615 ASB18Q6ZVZ8 466 aa19.82■□□□□ 0.76
PDLIM4-205ENST00000463615 TRIM73Q86UV7 250 aa19.82■□□□□ 0.76
PDLIM4-205ENST00000463615 DCUN1D3Q8IWE4 304 aa19.82■□□□□ 0.76
PDLIM4-205ENST00000463615 DNAJC22Q8N4W6 341 aa19.82■□□□□ 0.76
PDLIM4-205ENST00000463615 PANX3Q96QZ0 392 aa19.82■□□□□ 0.76
PDLIM4-205ENST00000463615 KLHL25Q9H0H3 589 aa19.82■□□□□ 0.76
PDLIM4-205ENST00000463615 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.81■□□□□ 0.76
PDLIM4-205ENST00000463615 KPNA5O15131 536 aa19.81■□□□□ 0.76
PDLIM4-205ENST00000463615 FKBP9O95302 570 aa19.81■□□□□ 0.76
PDLIM4-205ENST00000463615 BASP1P80723 227 aaKnown RBP19.81■□□□□ 0.76
PDLIM4-205ENST00000463615 CCZ1BP86790 482 aa19.81■□□□□ 0.76
PDLIM4-205ENST00000463615 CCZ1P86791 482 aaPredicted RBP19.81■□□□□ 0.76
PDLIM4-205ENST00000463615 TLDC1Q6P9B6 456 aa19.81■□□□□ 0.76
PDLIM4-205ENST00000463615 LINC01555Q8NAE3 123 aa19.81■□□□□ 0.76
PDLIM4-205ENST00000463615 PROKR1Q8TCW9 393 aa19.81■□□□□ 0.76
PDLIM4-205ENST00000463615 SLC22A18Q96BI1 424 aa19.81■□□□□ 0.76
PDLIM4-205ENST00000463615 ING2Q9H160 280 aa19.81■□□□□ 0.76
PDLIM4-205ENST00000463615 GNPTGQ9UJJ9 305 aa19.81■□□□□ 0.76
PDLIM4-205ENST00000463615 PCDHGB7Q9Y5F8 929 aa19.81■□□□□ 0.76
PDLIM4-205ENST00000463615 FLNCQ14315 2725 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 IQCF5A8MTL0 148 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 HCRTR1O43613 425 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 DNAJB5O75953 348 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 OR2B3O76000 313 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 PDGFAP04085 211 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 CD63P08962 238 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 NR1D1P20393 614 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 AGXTP21549 392 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 CD9P21926 228 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 ARNTP27540 789 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 GCGRP47871 477 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 TMED2Q15363 201 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 PTCHD3Q3KNS1 767 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 CPZQ66K79 652 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 GSTA5Q7RTV2 222 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 LDB1Q86U70 411 aaPredicted RBP19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 PRELID2Q8N945 189 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 TEX19Q8NA77 164 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 OR2L8Q8NGY9 312 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 GBP5Q96PP8 586 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 PLAGL1Q9UM63 463 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 SRPK3Q9UPE1 567 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 PLCL2Q9UPR0 1127 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 MRFAP1Q9Y605 127 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 MED13Q9UHV7 2174 aa19.8■□□□□ 0.76
PDLIM4-205ENST00000463615 PTPN13Q12923 2485 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 ISM1B1AKI9 464 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 C9J4A7 227 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 CEP104O60308 925 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 KLF7O75840 302 aaPredicted RBP19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 S1PR4O95977 384 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 NMBRP28336 390 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 PTGIRP43119 386 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 KCNJ1P48048 391 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 CD97P48960 835 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 CSE1LP55060 971 aaKnown RBP19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 ADARP55265 1226 aaKnown RBP19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 CRADDP78560 199 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 TYSND1Q2T9J0 566 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 ZBTB2Q8N680 514 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 TMEM102Q8N9M5 508 aaPredicted RBP19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 N4BP2L2Q92802 583 aaPredicted RBP19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 IP6K3Q96PC2 410 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 TCF12Q99081 682 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 RAB11FIP5Q9BXF6 653 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 SLC7A5P2Q9GIP4 190 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 SPRTNQ9H040 489 aaPredicted RBP19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 ACSS2Q9NR19 701 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 SOX13Q9UN79 622 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 PADI2Q9Y2J8 665 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 HECTD1Q9ULT8 2610 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 FER1L5A0AVI2 2057 aa19.79■□□□□ 0.76
PDLIM4-205ENST00000463615 SNRNP200O75643 2136 aaKnown RBP19.78■□□□□ 0.76
PDLIM4-205ENST00000463615 ARGFXA6NJG6 315 aa19.78■□□□□ 0.76
PDLIM4-205ENST00000463615 RASGRF2O14827 1237 aa19.78■□□□□ 0.76
PDLIM4-205ENST00000463615 ZSCAN9O15535 394 aaPredicted RBP19.78■□□□□ 0.76
PDLIM4-205ENST00000463615 PRICKLE3O43900 615 aaPredicted RBP19.78■□□□□ 0.76
PDLIM4-205ENST00000463615 NDUFS3O75489 264 aa19.78■□□□□ 0.76
PDLIM4-205ENST00000463615 TMEM63AO94886 807 aa19.78■□□□□ 0.76
PDLIM4-205ENST00000463615 GBX1Q14549 363 aa19.78■□□□□ 0.76
PDLIM4-205ENST00000463615 KCNJ11Q14654 390 aa19.78■□□□□ 0.76
PDLIM4-205ENST00000463615 PTRHD1Q6GMV3 140 aaKnown RBP19.78■□□□□ 0.76
PDLIM4-205ENST00000463615 MED25Q71SY5 747 aa19.78■□□□□ 0.76
PDLIM4-205ENST00000463615 HPS6Q86YV9 775 aa19.78■□□□□ 0.76
PDLIM4-205ENST00000463615 KRT222Q8N1A0 295 aa19.78■□□□□ 0.76
PDLIM4-205ENST00000463615 RASGEF1CQ8N431 466 aa19.78■□□□□ 0.76
PDLIM4-205ENST00000463615 HMGCLL1Q8TB92 370 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms