RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 TRAPPC9Q96Q05 1148 aa14.39□□□□□ -0.11
RTN4-210ENST00000427710 OR2A14Q96R47 310 aa14.39□□□□□ -0.11
RTN4-210ENST00000427710 DPH5Q9H2P9 285 aa14.39□□□□□ -0.11
RTN4-210ENST00000427710 PDE7BQ9NP56 450 aa14.39□□□□□ -0.11
RTN4-210ENST00000427710 C1GALT1Q9NS00 363 aa14.39□□□□□ -0.11
RTN4-210ENST00000427710 IL17BQ9UHF5 180 aa14.39□□□□□ -0.11
RTN4-210ENST00000427710 POLG2Q9UHN1 485 aa14.39□□□□□ -0.11
RTN4-210ENST00000427710 FBXO5Q9UKT4 447 aa14.39□□□□□ -0.11
RTN4-210ENST00000427710 BTRCQ9Y297 605 aa14.39□□□□□ -0.11
RTN4-210ENST00000427710 KLHL20Q9Y2M5 609 aa14.39□□□□□ -0.11
RTN4-210ENST00000427710 MRPS18BQ9Y676 258 aaKnown RBP14.39□□□□□ -0.11
RTN4-210ENST00000427710 COL6A6A6NMZ7 2263 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 EFCAB8A8MWE9 144 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 E5RI56 91 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 PFDN6O15212 129 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 RAD51CO43502 376 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 SEC31AO94979 1220 aaKnown RBP14.38□□□□□ -0.11
RTN4-210ENST00000427710 PRB1P04280 392 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 F8A1P23610 371 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 ACY1Q03154 408 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 CUL1Q13616 776 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 ZIC1Q15915 447 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 DEFB110Q30KQ9 67 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 C6orf15Q6UXA7 325 aaPredicted RBP14.38□□□□□ -0.11
RTN4-210ENST00000427710 UNC5DQ6UXZ4 953 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 DCUN1D3Q8IWE4 304 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 ZBTB2Q8N680 514 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 LINC01555Q8NAE3 123 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 SPATA4Q8NEY3 305 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 GIMAP7Q8NHV1 300 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 ZNF501Q96CX3 271 aaPredicted RBP14.38□□□□□ -0.11
RTN4-210ENST00000427710 SNF8Q96H20 258 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 UBL7Q96S82 380 aaPredicted RBP14.38□□□□□ -0.11
RTN4-210ENST00000427710 MENTQ9BUN1 341 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 AKIRIN1Q9H9L7 192 aaPredicted RBP14.38□□□□□ -0.11
RTN4-210ENST00000427710 FAM60AQ9NP50 221 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 INTS10Q9NVR2 710 aaKnown RBP14.38□□□□□ -0.11
RTN4-210ENST00000427710 RNF14Q9UBS8 474 aa14.38□□□□□ -0.11
RTN4-210ENST00000427710 TMEM150CB9EJG8 249 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 H3BMM5 538 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 MATN2O00339 956 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 KPNA5O15131 536 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 TP73O15350 636 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 HCRTR1O43613 425 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 C1orf105O95561 183 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 CTSBP07858 339 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 MAP4P27816 1152 aaKnown RBP14.37□□□□□ -0.11
RTN4-210ENST00000427710 CARSP49589 748 aaKnown RBP14.37□□□□□ -0.11
RTN4-210ENST00000427710 CLCN7P51798 805 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 ADARP55265 1226 aaKnown RBP14.37□□□□□ -0.11
RTN4-210ENST00000427710 TUBB4BP68371 445 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 TUBB2AQ13885 445 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 GBX1Q14549 363 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 FASTKD3Q14CZ7 662 aaKnown RBP14.37□□□□□ -0.11
RTN4-210ENST00000427710 KLHL38Q2WGJ6 581 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.37□□□□□ -0.112e-6■■□□□ 11.4
RTN4-210ENST00000427710 TAF1BQ53T94 588 aaPredicted RBP14.37□□□□□ -0.11
RTN4-210ENST00000427710 SPANXN3Q5MJ09 141 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 TMTC4Q5T4D3 741 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 TRMT10BQ6PF06 316 aaKnown RBP14.37□□□□□ -0.11
RTN4-210ENST00000427710 CDHR3Q6ZTQ4 885 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 OR1L3Q8NH93 324 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 SNRNP27Q8WVK2 155 aaKnown RBP14.37□□□□□ -0.11
RTN4-210ENST00000427710 TTC9Q92623 222 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 C16orf45Q96MC5 204 aaPredicted RBP14.37□□□□□ -0.11
RTN4-210ENST00000427710 NDNQ99608 321 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 GPR21Q99679 349 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 TUBB2BQ9BVA1 445 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 PITPNM3Q9BZ71 974 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 GPN2Q9H9Y4 310 aaPredicted RBP14.37□□□□□ -0.11
RTN4-210ENST00000427710 CROTQ9UKG9 612 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 SLC39A10Q9ULF5 831 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 MED16Q9Y2X0 877 aa14.37□□□□□ -0.11
RTN4-210ENST00000427710 BSNQ9UPA5 3926 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 A0A0J9YY10 115 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 RASGRF2O14827 1237 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 NKX2-8O15522 239 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 ATXN8OSP0DMR3 200 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 PRKAR1AP10644 381 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 GABRB3P28472 473 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 DLSTP36957 453 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 STAT5AP42229 794 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 RAB28P51157 221 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 PGGT1BP53609 377 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 ABHD18Q0P651 414 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 HIF1AQ16665 826 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 RBM20Q5T481 1227 aaKnown RBP14.36□□□□□ -0.11
RTN4-210ENST00000427710 ATP1A1-AS1Q5TC04 95 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 FAM199XQ6PEV8 388 aaPredicted RBP14.36□□□□□ -0.11
RTN4-210ENST00000427710 TMEM126BQ8IUX1 230 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 PDIK1LQ8N165 341 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 ESX1Q8N693 406 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 C19orf47Q8N9M1 422 aaKnown RBP14.36□□□□□ -0.11
RTN4-210ENST00000427710 C2CD4AQ8NCU7 369 aaPredicted RBP14.36□□□□□ -0.11
RTN4-210ENST00000427710 CALML6Q8TD86 181 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 DENND1AQ8TEH3 1009 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 EXTL1Q92935 676 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 RUFY1Q96T51 708 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 FAM167BQ9BTA0 163 aa14.36□□□□□ -0.11
RTN4-210ENST00000427710 AARSD1Q9BTE6 412 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms