RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 KCNMB4Q86W47 210 aa17.31■□□□□ 0.36
IGHV3-47-201ENST00000425060 ZBTB2Q8N680 514 aa17.31■□□□□ 0.36
IGHV3-47-201ENST00000425060 GALNT6Q8NCL4 622 aa17.31■□□□□ 0.36
IGHV3-47-201ENST00000425060 OR8K5Q8NH50 307 aa17.31■□□□□ 0.36
IGHV3-47-201ENST00000425060 CALML6Q8TD86 181 aa17.31■□□□□ 0.36
IGHV3-47-201ENST00000425060 SLC45A3Q96JT2 553 aa17.31■□□□□ 0.36
IGHV3-47-201ENST00000425060 KRT12Q99456 494 aa17.31■□□□□ 0.36
IGHV3-47-201ENST00000425060 WDR83Q9BRX9 315 aaKnown RBP17.31■□□□□ 0.36
IGHV3-47-201ENST00000425060 NAT9Q9BTE0 207 aa17.31■□□□□ 0.36
IGHV3-47-201ENST00000425060 CHRNA10Q9GZZ6 450 aa17.31■□□□□ 0.36
IGHV3-47-201ENST00000425060 SYTL2Q9HCH5 934 aa17.31■□□□□ 0.36
IGHV3-47-201ENST00000425060 TK2O00142 265 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 HAUS5O94927 633 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 F8A1P23610 371 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 GABRA4P48169 554 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 ITGA8P53708 1063 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 MPP1Q00013 466 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 KIR2DS3Q14952 304 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 ZIC1Q15915 447 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 BBS9Q3SYG4 887 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 CCSMST1Q4G0I0 132 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 SPANXN3Q5MJ09 141 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 TRIM73Q86UV7 250 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 C2CD4AQ8NCU7 369 aaPredicted RBP17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 SPATA4Q8NEY3 305 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 FAM136AQ96C01 138 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 SNF8Q96H20 258 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 SLC30A3Q99726 388 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 KLHL25Q9H0H3 589 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 IARS2Q9NSE4 1012 aaKnown RBP17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 SOHLH2Q9NX45 425 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 KLHL42Q9P2K6 505 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 CIDEBQ9UHD4 219 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 IL17BQ9UHF5 180 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 LNPEPQ9UIQ6 1025 aa17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 RUVBL2Q9Y230 463 aaKnown RBP17.3■□□□□ 0.36
IGHV3-47-201ENST00000425060 ATMQ13315 3056 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 RASGRF2O14827 1237 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 PRICKLE3O43900 615 aaPredicted RBP17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 MT-ND3P03897 115 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 ERVK-10P10266 1014 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 CD9P21926 228 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 GABRB3P28472 473 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 CASQ1P31415 396 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 ELK3P41970 407 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 CYP4F2P78329 520 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 SLC5A12Q1EHB4 618 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 ACSBG2Q5FVE4 666 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 CNSTQ6PJW8 725 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 SYT10Q6XYQ8 523 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 CDHR3Q6ZTQ4 885 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 SPNS2Q8IVW8 549 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 CNTN4Q8IWV2 1026 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 PDIK1LQ8N165 341 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 LMNTD1Q8N9Z9 388 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 ZSCAN1Q8NBB4 408 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 OR2L8Q8NGY9 312 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 OR1L3Q8NH93 324 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 GIMAP7Q8NHV1 300 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 GSDMBQ8TAX9 411 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 KCNJ9Q92806 393 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 RAD51AP1Q96B01 352 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 IL17FQ96PD4 163 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 FAM167BQ9BTA0 163 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 EFHD1Q9BUP0 239 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 AKIRIN1Q9H9L7 192 aaPredicted RBP17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 GPN2Q9H9Y4 310 aaPredicted RBP17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 FAM60AQ9NP50 221 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 LHX9Q9NQ69 397 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 TEX264Q9Y6I9 313 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 SMG1Q96Q15 3661 aaKnown RBP17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 SPTBP11277 2137 aa17.29■□□□□ 0.36
IGHV3-47-201ENST00000425060 A0A0J9YY10 115 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 EFCAB8A8MWE9 144 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 NTRK1P04629 796 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 ITGB2P05107 769 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 BDKRB1P46663 353 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 RPL21P46778 160 aaKnown RBP17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 MRPS25P82663 173 aaKnown RBP17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 TIAL1Q01085 375 aaKnown RBP eCLIP17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 KLHL38Q2WGJ6 581 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 LINC00303Q3SY05 128 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 PRAMEF17Q5VTA0 474 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 STEAP4Q687X5 459 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 NEK10Q6ZWH5 1172 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 C19orf47Q8N9M1 422 aaKnown RBP17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 SLC38A9Q8NBW4 561 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 HMGCLL1Q8TB92 370 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 DENND1AQ8TEH3 1009 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 SLC39A7Q92504 469 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 KIAA1143Q96AT1 154 aaPredicted RBP17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 LRRC39Q96DD0 335 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 AARSD1Q9BTE6 412 aaKnown RBP17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 TRIM31Q9BZY9 425 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 PADI1Q9ULC6 663 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 SNX24Q9Y343 169 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 DHRS7Q9Y394 339 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 PCDHB3Q9Y5E6 796 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 MRFAP1Q9Y605 127 aa17.28■□□□□ 0.36
IGHV3-47-201ENST00000425060 COMMD10Q9Y6G5 202 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms