RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 GABRR2P28476 465 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 L1CAMP32004 1257 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 CBX5P45973 191 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 TSPAN5P62079 268 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 ODF4Q2M2E3 257 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 PABPC1LQ4VXU2 614 aaKnown RBP11.83□□□□□ -0.52
UBR4-205ENST00000417040 HERC2P3Q9BVR0 1158 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 LRRC3Q9BY71 257 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 C1orf109Q9NX04 203 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 FZD4Q9ULV1 537 aa11.83□□□□□ -0.52
UBR4-205ENST00000417040 QSOX1O00391 747 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 MAGEA12P43365 314 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 TLR1Q15399 786 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 OCLNQ16625 522 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 PRAMEF17Q5VTA0 474 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 LRRC52Q8N7C0 313 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 MINDY2Q8NBR6 621 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 C8orf48Q96LL4 319 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 TCF7L1Q9HCS4 588 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 CUEDC1Q9NWM3 386 aaPredicted RBP11.82□□□□□ -0.52
UBR4-205ENST00000417040 C14orf119Q9NWQ9 140 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 COL20A1Q9P218 1284 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 TLR4O00206 839 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 CCL16O15467 120 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 PDPK1O15530 556 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 INMTO95050 263 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 SOX14O95416 240 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 ACADLP28330 430 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 CRYBB1P53674 252 aaPredicted RBP11.82□□□□□ -0.52
UBR4-205ENST00000417040 PITPNAQ00169 270 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 ANKRD26P1Q6NSI1 321 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 RPL10LQ96L21 214 aaKnown RBP11.82□□□□□ -0.52
UBR4-205ENST00000417040 C5orf34Q96MH7 638 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 PKP4Q99569 1192 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 ZNF350Q9GZX5 532 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 CHMP1AQ9HD42 196 aaPredicted RBP11.82□□□□□ -0.52
UBR4-205ENST00000417040 TIGARQ9NQ88 270 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 CMAHPQ9Y471 501 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 PITPNM1O00562 1244 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 INSIG1O15503 277 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 PLA2G16P53816 162 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 PPP1R3AQ16821 1122 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 OR4F3Q6IEY1 312 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 EPGNQ6UW88 154 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 DEFB132Q7Z7B7 95 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 IGDCC3Q8IVU1 814 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 OR6K6Q8NGW6 343 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 OR4C6Q8NH72 309 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 COQ8AQ8NI60 647 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 RFKQ969G6 155 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 GPR20Q99678 358 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 TTYH2Q9BSA4 534 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 MED11Q9P086 117 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 ADAMTS6Q9UKP5 1117 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 ATRNO75882 1429 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 CHRM1P11229 460 aaPredicted RBP11.82□□□□□ -0.52
UBR4-205ENST00000417040 S100GP29377 79 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 MAPK8P45983 427 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 PSMD8P48556 350 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 UAP1L1Q3KQV9 507 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 USP41Q3LFD5 358 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 FOXR2Q6PJQ5 311 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 SLITRK4Q8IW52 837 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 LNX2Q8N448 690 aa11.82□□□□□ -0.52
UBR4-205ENST00000417040 KIAA1522Q9P206 1035 aaPredicted RBP11.82□□□□□ -0.52
UBR4-205ENST00000417040 YARS2Q9Y2Z4 477 aaKnown RBP11.82□□□□□ -0.52
UBR4-205ENST00000417040 COL5A2P05997 1499 aaPredicted RBP11.82□□□□□ -0.52
UBR4-205ENST00000417040 TSPAN1O60635 241 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 NIPSNAP2O75323 286 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 TUSC3Q13454 348 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 RAB39AQ14964 217 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 RABL3Q5HYI8 236 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 PAQR3Q6TCH7 311 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 KCTD7Q96MP8 289 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 TRMT61BQ9BVS5 477 aaKnown RBP11.81□□□□□ -0.52
UBR4-205ENST00000417040 MTFR1LQ9H019 292 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 A0A0G2JPF8 293 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 KANTRA0A1W2PQU2 76 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 A8MT66 165 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 HNRNPCL3B7ZW38 293 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 C1QTNF3-AMACRE9PGA6 284 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 ECI2O75521 394 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 HNRNPCL4P0DMR1 293 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 IMPDH1P20839 514 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 ACVR2AP27037 513 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 ECHS1P30084 290 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 OR1D2P34982 312 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 SKP1P63208 163 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 SYNPOQ8N3V7 929 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 CNIH3Q8TBE1 160 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 DNAJA4Q8WW22 397 aaPredicted RBP11.81□□□□□ -0.52
UBR4-205ENST00000417040 BIRC7Q96CA5 298 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 HTATIP2Q9BUP3 242 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 DUSP26Q9BV47 211 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 SLC25A51Q9H1U9 297 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 MARK1Q9P0L2 795 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 EBF1Q9UH73 591 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 FBXW11Q9UKB1 542 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 ADGRB1O14514 1584 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 M0R036 132 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms