RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 MRPS18BQ9Y676 258 aaKnown RBP17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 PIKFYVEQ9Y2I7 2098 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 TMEM150CB9EJG8 249 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 H3BMM5 538 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 CCDC188H7C350 402 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 NKX2-8O15522 239 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 SCRG1O75711 98 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 RPN2P04844 631 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 ERVK-10P10266 1014 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 PRKAR1AP10644 381 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 F8A1P23610 371 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 PEBP1P30086 187 aaKnown RBP17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 CASQ1P31415 396 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 RAB28P51157 221 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 ITGA8P53708 1063 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 LY6DQ14210 128 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 PLEKHS1Q5SXH7 462 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 ZNF549Q6P9A3 640 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 KCNMB4Q86W47 210 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 TMEM126BQ8IUX1 230 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 ZBTB2Q8N680 514 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 LINC01555Q8NAE3 123 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 FLVCR1-AS1Q8TAF5 88 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 CFAP36Q96G28 342 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 SLC30A3Q99726 388 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 EBNA1BP2Q99848 306 aaKnown RBP17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 SLC12A9Q9BXP2 914 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 KCND1Q9NSA2 647 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 FBXO5Q9UKT4 447 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 VPS9D1Q9Y2B5 631 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 KLHL20Q9Y2M5 609 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 FAM169AQ9Y6X4 670 aa17.56■□□□□ 0.4
PTPRN2-204ENST00000404321 KDM1AO60341 852 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 CD9P21926 228 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 DLSTP36957 453 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 ADARP55265 1226 aaKnown RBP17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 CUL1Q13616 776 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 MAP7Q14244 749 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 MORF4L2Q15014 288 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 ZIC1Q15915 447 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 KYNUQ16719 465 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 DEFB110Q30KQ9 67 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 HIBCHQ6NVY1 386 aaPredicted RBP17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 TTC23LQ6PF05 361 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 CDHR3Q6ZTQ4 885 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 C19orf47Q8N9M1 422 aaKnown RBP17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 OR1L3Q8NH93 324 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 FAM167BQ9BTA0 163 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 MENTQ9BUN1 341 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 CCDC68Q9H2F9 335 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 AKIRIN1Q9H9L7 192 aaPredicted RBP17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 FANCEQ9HB96 536 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 FAM60AQ9NP50 221 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 SLC17A6Q9P2U8 582 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 RNF14Q9UBS8 474 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 SLC39A10Q9ULF5 831 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 CHMP2BQ9UQN3 213 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 SNX24Q9Y343 169 aa17.55■□□□□ 0.4
PTPRN2-204ENST00000404321 EFCAB8A8MWE9 144 aa17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 MAP3K7O43318 606 aa17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 KATNA1O75449 491 aa17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 HAUS5O94927 633 aa17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 CCNYL3P0C7X3 344 aa17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 ELK3P41970 407 aa17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 CLCN7P51798 805 aa17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 ETF1P62495 437 aaKnown RBP17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 C2orf54Q08AI8 447 aa17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 ATP1A1-AS1Q5TC04 95 aa17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 FAM199XQ6PEV8 388 aaPredicted RBP17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 BPHLQ86WA6 291 aaPredicted RBP17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 PDIK1LQ8N165 341 aa17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 GIMAP7Q8NHV1 300 aa17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 CALML6Q8TD86 181 aa17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 SNF8Q96H20 258 aa17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 FOPNLQ96NB1 174 aa17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 WDR83Q9BRX9 315 aaKnown RBP17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 PADI1Q9ULC6 663 aa17.54■□□□□ 0.4
PTPRN2-204ENST00000404321 A0A0J9YY10 115 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 ZNF891A8MT65 544 aaPredicted RBP17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 RASGRF2O14827 1237 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 HCRTR1O43613 425 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 SEC31AO94979 1220 aaKnown RBP17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 C1orf105O95561 183 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 ATXN8OSP0DMR3 200 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 RPL21P46778 160 aaKnown RBP17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 KIR2DS3Q14952 304 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 TBR1Q16650 682 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 KLHL38Q2WGJ6 581 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 LINC00303Q3SY05 128 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 C16orf46Q6P387 395 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 ANKMY2Q8IV38 441 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 SLC38A9Q8NBW4 561 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 CT55Q8WUE5 264 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 STARD8Q92502 1023 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 SLC45A3Q96JT2 553 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 FCRL4Q96PJ5 515 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 RUFY1Q96T51 708 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 NDNQ99608 321 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 SEMA4CQ9C0C4 833 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 PLAC1Q9HBJ0 212 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms