RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 H2AFJQ9BTM1 129 aa32.33■■■□□ 2.77
CSNK1E-204ENST00000403904 TRIM54Q9BYV2 358 aa32.33■■■□□ 2.77
CSNK1E-204ENST00000403904 C12orf65Q9H3J6 166 aaKnown RBP32.33■■■□□ 2.77
CSNK1E-204ENST00000403904 XKR8Q9H6D3 395 aa32.33■■■□□ 2.77
CSNK1E-204ENST00000403904 XPR1Q9UBH6 696 aa32.33■■■□□ 2.77
CSNK1E-204ENST00000403904 CFAP54Q96N23 3096 aa32.33■■■□□ 2.77
CSNK1E-204ENST00000403904 MYO1CO00159 1063 aa32.32■■■□□ 2.77
CSNK1E-204ENST00000403904 MAGOHP61326 146 aaKnown RBP32.32■■■□□ 2.77
CSNK1E-204ENST00000403904 N4BP2L1Q5TBK1 243 aaPredicted RBP32.32■■■□□ 2.77
CSNK1E-204ENST00000403904 OR6C4Q8NGE1 309 aa32.32■■■□□ 2.77
CSNK1E-204ENST00000403904 LCN9Q8WX39 176 aa32.32■■■□□ 2.77
CSNK1E-204ENST00000403904 CCDC74AQ96AQ1 378 aa32.32■■■□□ 2.77
CSNK1E-204ENST00000403904 TLCD1Q96CP7 247 aa32.32■■■□□ 2.77
CSNK1E-204ENST00000403904 IL17FQ96PD4 163 aa32.32■■■□□ 2.77
CSNK1E-204ENST00000403904 LDHAL6BQ9BYZ2 381 aaPredicted RBP32.32■■■□□ 2.77
CSNK1E-204ENST00000403904 ARL15Q9NXU5 204 aa32.32■■■□□ 2.77
CSNK1E-204ENST00000403904 PABPN1LA6NDY0 278 aaKnown RBP32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 KERAO60938 352 aa32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 RBP1P09455 135 aa32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 CKMT2P17540 419 aa32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 DUSP3P51452 185 aaPredicted RBP32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 KPNA2P52292 529 aaKnown RBP32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 TGFBIQ15582 683 aa32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 TTMPQ5BVD1 217 aa32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 ZNF438Q7Z4V0 828 aa32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 PIP4P1Q86T03 277 aa32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 ALKBH8Q96BT7 664 aaKnown RBP32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 MENTQ9BUN1 341 aa32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 UCK1Q9HA47 277 aa32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 RDH14Q9HBH5 336 aa32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 MKS1Q9NXB0 559 aa32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 CPSF2Q9P2I0 782 aaKnown RBP32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 GRID1Q9ULK0 1009 aa32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 ICKQ9UPZ9 632 aa32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 ACTL7BQ9Y614 415 aa32.32■■■□□ 2.76
CSNK1E-204ENST00000403904 NCF1BA6NI72 391 aaPredicted RBP32.31■■■□□ 2.76
CSNK1E-204ENST00000403904 NCF1CA8MVU1 366 aaPredicted RBP32.31■■■□□ 2.76
CSNK1E-204ENST00000403904 TK2O00142 265 aa32.31■■■□□ 2.76
CSNK1E-204ENST00000403904 ATP8B1O43520 1251 aa32.31■■■□□ 2.76
CSNK1E-204ENST00000403904 NCF1P14598 390 aaPredicted RBP32.31■■■□□ 2.76
CSNK1E-204ENST00000403904 ALDH4A1P30038 563 aa32.31■■■□□ 2.76
CSNK1E-204ENST00000403904 PERM1Q5SV97 790 aa32.31■■■□□ 2.76
CSNK1E-204ENST00000403904 EFL1Q7Z2Z2 1120 aaKnown RBP32.31■■■□□ 2.76
CSNK1E-204ENST00000403904 LMNTD1Q8N9Z9 388 aa32.31■■■□□ 2.76
CSNK1E-204ENST00000403904 OR4E2Q8NGC2 313 aa32.31■■■□□ 2.76
CSNK1E-204ENST00000403904 MRPL57Q9BQC6 102 aaKnown RBP32.31■■■□□ 2.76
CSNK1E-204ENST00000403904 EMCNQ9ULC0 261 aa32.31■■■□□ 2.76
CSNK1E-204ENST00000403904 SLC16A8O95907 504 aa32.3■■■□□ 2.76
CSNK1E-204ENST00000403904 AP1S2P56377 157 aa32.3■■■□□ 2.76
CSNK1E-204ENST00000403904 TMEM151AQ8N4L1 468 aa32.3■■■□□ 2.76
CSNK1E-204ENST00000403904 Q8N9G6 341 aaPredicted RBP32.3■■■□□ 2.76
CSNK1E-204ENST00000403904 NETO1Q8TDF5 533 aa32.3■■■□□ 2.76
CSNK1E-204ENST00000403904 DENND1AQ8TEH3 1009 aa32.3■■■□□ 2.76
CSNK1E-204ENST00000403904 NAT6Q93015 286 aa32.3■■■□□ 2.76
CSNK1E-204ENST00000403904 ATP6V1G3Q96LB4 118 aa32.3■■■□□ 2.76
CSNK1E-204ENST00000403904 CCDC138Q96M89 665 aa32.3■■■□□ 2.76
CSNK1E-204ENST00000403904 IQCGQ9H095 443 aaKnown RBP32.3■■■□□ 2.76
CSNK1E-204ENST00000403904 MRPL46Q9H2W6 279 aaKnown RBP32.3■■■□□ 2.76
CSNK1E-204ENST00000403904 EVA1BQ9NVM1 165 aa32.3■■■□□ 2.76
CSNK1E-204ENST00000403904 UBXN8O00124 270 aa32.29■■■□□ 2.76
CSNK1E-204ENST00000403904 TYROBPO43914 113 aa32.29■■■□□ 2.76
CSNK1E-204ENST00000403904 KDM1AO60341 852 aa32.29■■■□□ 2.76
CSNK1E-204ENST00000403904 IFI44Q8TCB0 444 aa32.29■■■□□ 2.76
CSNK1E-204ENST00000403904 EGFL8Q99944 293 aa32.29■■■□□ 2.76
CSNK1E-204ENST00000403904 SRMSQ9H3Y6 488 aa32.29■■■□□ 2.76
CSNK1E-204ENST00000403904 CCDC189A1A4V9 331 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 LILRA5A6NI73 299 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 SUPT3HB4E1H0 165 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 SUPT3HO75486 399 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 SBK3P0C264 359 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 RAB28P51157 221 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 OR1D5P58170 312 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 AMIGO1Q86WK6 493 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 CDC6Q99741 560 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 KCNK4Q9NYG8 393 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 CD274Q9NZQ7 290 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 SYCE1LA8MT33 242 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 PNLIPP16233 465 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 GPR3P46089 330 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 NR1D2Q14995 579 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 C2orf73Q8N5S3 287 aaPredicted RBP32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 TCP10LQ8TDR4 215 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 ZNF480Q8WV37 535 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 PKNOX2Q96KN3 472 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 SSU72Q9NP77 194 aaKnown RBP32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 STOX2Q9P2F5 926 aaPredicted RBP32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 LNPEPQ9UIQ6 1025 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 PLLPQ9Y342 182 aa32.28■■■□□ 2.76
CSNK1E-204ENST00000403904 PCNX2A6NKB5 2137 aa32.27■■■□□ 2.76
CSNK1E-204ENST00000403904 MTHFD2P13995 350 aa32.27■■■□□ 2.76
CSNK1E-204ENST00000403904 TYRP1P17643 537 aa32.27■■■□□ 2.76
CSNK1E-204ENST00000403904 ACP1P24666 158 aa32.27■■■□□ 2.76
CSNK1E-204ENST00000403904 IMPA1P29218 277 aa32.27■■■□□ 2.76
CSNK1E-204ENST00000403904 PKLRP30613 574 aa32.27■■■□□ 2.76
CSNK1E-204ENST00000403904 SHMT2P34897 504 aa32.27■■■□□ 2.76
CSNK1E-204ENST00000403904 CDKL1Q00532 357 aa32.27■■■□□ 2.76
CSNK1E-204ENST00000403904 RAB42Q8N4Z0 105 aa32.27■■■□□ 2.76
CSNK1E-204ENST00000403904 DEFB124Q8NES8 71 aa32.27■■■□□ 2.76
CSNK1E-204ENST00000403904 CCDC3Q9BQI4 270 aa32.27■■■□□ 2.76
CSNK1E-204ENST00000403904 KCNK9Q9NPC2 374 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms