RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 N4BP2L2Q92802 583 aaPredicted RBP13.49□□□□□ -0.25
SEC13-204ENST00000397099 ELMO2Q96JJ3 720 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 TRAPPC9Q96Q05 1148 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 NAPGQ99747 312 aaPredicted RBP13.49□□□□□ -0.25
SEC13-204ENST00000397099 CCDC68Q9H2F9 335 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 ASIC3Q9UHC3 531 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 CROTQ9UKG9 612 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 SLC39A10Q9ULF5 831 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 SAR1BQ9Y6B6 198 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 AP1M2Q9Y6Q5 423 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 A0A0J9YY10 115 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 E5RI56 91 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 CCDC188H7C350 402 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 PYCARD-AS1I3L0S3 204 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 AVILO75366 819 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 ST6GAL1P15907 406 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 UGT2B7P16662 529 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 ZNF28P17035 718 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 CYP2A7P20853 494 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 ITGA1P56199 1179 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 PTK6Q13882 451 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 KCNAB1Q14722 419 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 LONRF1Q17RB8 773 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 RNASEH2BQ5TBB1 312 aaKnown RBP13.48□□□□□ -0.25
SEC13-204ENST00000397099 ANKRD22Q5VYY1 191 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 NEK10Q6ZWH5 1172 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 LDB1Q86U70 411 aaPredicted RBP13.48□□□□□ -0.25
SEC13-204ENST00000397099 UNC5BQ8IZJ1 945 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 C19orf47Q8N9M1 422 aaKnown RBP13.48□□□□□ -0.25
SEC13-204ENST00000397099 ZNF669Q96BR6 464 aaPredicted RBP13.48□□□□□ -0.25
SEC13-204ENST00000397099 RNF31Q96EP0 1072 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 BIRC8Q96P09 236 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 OR2A14Q96R47 310 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 FAM167BQ9BTA0 163 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 FAM114A2Q9NRY5 505 aa13.48□□□□□ -0.25
SEC13-204ENST00000397099 GEMIN8Q9NWZ8 242 aaKnown RBP13.48□□□□□ -0.25
SEC13-204ENST00000397099 ZNF839A8K0R7 811 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 IQCF5A8MTL0 148 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 ISM1B1AKI9 464 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 TMEM150CB9EJG8 249 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 E7EQ34 232 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 DNALI1O14645 258 aaPredicted RBP13.47□□□□□ -0.25
SEC13-204ENST00000397099 RASGRF2O14827 1237 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 PRKAR1AP10644 381 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 PKMP14618 531 aaKnown RBP13.47□□□□□ -0.25
SEC13-204ENST00000397099 ITGB6P18564 788 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 CHRM3P20309 590 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 CD9P21926 228 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 PKLRP30613 574 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 FMO4P31512 558 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 HSD17B2P37059 387 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 CSE1LP55060 971 aaKnown RBP13.47□□□□□ -0.25
SEC13-204ENST00000397099 NFKB2Q00653 900 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 ABRQ12979 859 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 DNASE1L3Q13609 305 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 MORF4L2Q15014 288 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 GPR19Q15760 415 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 IZUMO3Q5VZ72 239 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 LRRC8EQ6NSJ5 796 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 ZNF517Q6ZMY9 492 aaPredicted RBP13.47□□□□□ -0.25
SEC13-204ENST00000397099 KRT222Q8N1A0 295 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.47□□□□□ -0.25
SEC13-204ENST00000397099 OR2L8Q8NGY9 312 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 HMGCLL1Q8TB92 370 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 SKA2Q8WVK7 121 aaPredicted RBP13.47□□□□□ -0.25
SEC13-204ENST00000397099 APOBEC4Q8WW27 367 aaKnown RBP13.47□□□□□ -0.25
SEC13-204ENST00000397099 KCNJ9Q92806 393 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 SLC7A5P2Q9GIP4 190 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 XKR8Q9H6D3 395 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 SPATA7Q9P0W8 599 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 MAD1L1Q9Y6D9 718 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 FAM169AQ9Y6X4 670 aa13.47□□□□□ -0.25
SEC13-204ENST00000397099 BSNQ9UPA5 3926 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 ZCWPW2A0A1B0GU75 182 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 GOLGA8MH3BSY2 632 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 EIF3FO00303 357 aaPredicted RBP13.46□□□□□ -0.25
SEC13-204ENST00000397099 TERTO14746 1132 aaKnown RBP13.46□□□□□ -0.25
SEC13-204ENST00000397099 ZNF185O15231 689 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 CREG1O75629 220 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 TIAF1O95411 115 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 MATN4O95460 622 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 C1orf105O95561 183 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 NTRK1P04629 796 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 RAB40ALP0C0E4 278 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 ENO3P13929 434 aaPredicted RBP13.46□□□□□ -0.25
SEC13-204ENST00000397099 PGAM1P18669 254 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 AGXTP21549 392 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 PTPN4P29074 926 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 TERF1P54274 439 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 DR1Q01658 176 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 GBX1Q14549 363 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 CTSL3PQ5NE16 218 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 ZNF470Q6ECI4 717 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 UGT3A1Q6NUS8 523 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 TLDC1Q6P9B6 456 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 CES3Q6UWW8 571 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 NAPRTQ6XQN6 538 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 CENPUQ71F23 418 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 SYVN1Q86TM6 617 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 VRK3Q8IV63 474 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms