RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 C1QTNF7Q9BXJ2 289 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 ATG10Q9H0Y0 220 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 KLQ9UEF7 1012 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 SLC22A14Q9Y267 594 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 PCYT1BQ9Y5K3 369 aaPredicted RBP11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 MYO10Q9HD67 2058 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 NUMA1Q14980 2115 aa11.15□□□□□ -0.63
SMARCAL1-203ENST00000392128 KCNE1BA0A087WTH5 132 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 KLHL33A6NCF5 533 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 BBIP1A8MTZ0 92 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 SLC28A1O00337 649 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 MANBAO00462 879 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 FBP2O00757 339 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 RGS14O43566 566 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 UGDHO60701 494 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 ENTPD5O75356 428 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 KRT6AP02538 564 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 KRT6BP04259 564 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 ACADLP28330 430 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 IMPA1P29218 277 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 KRT6CP48668 564 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 DIO3P55073 304 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 EMX2Q04743 252 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 SFSWAPQ12872 951 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 NFE2L1Q14494 772 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 RPS6KA2Q15349 733 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 CCSMST1Q4G0I0 132 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 PDCD4Q53EL6 469 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 EOGTQ5NDL2 527 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 IER5LQ5T953 404 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 REP15Q6BDI9 236 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 DOK6Q6PKX4 331 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 AGTRAPQ6RW13 159 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 AMZ2Q86W34 360 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 HORMAD1Q86X24 394 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 FBXW8Q8N3Y1 598 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 FNDC5Q8NAU1 212 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 OR56A3Q8NH54 315 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 FOXJ1Q92949 421 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 PPP3R2Q96LZ3 170 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 NPAS2Q99743 824 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 SLC17A9Q9BYT1 436 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 OR52A5Q9H2C5 316 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 PHPT1Q9NRX4 125 aaPredicted RBP11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 SHISA7A6NL88 538 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 FFAR3O14843 346 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 GPR42O15529 346 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 NRP2O60462 931 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 SLC16A8O95907 504 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 LMNAP02545 664 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 MYCLP1P12525 358 aaPredicted RBP11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 ITPKAP23677 461 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 MTTPP55157 894 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 PCDH1Q08174 1060 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 CCINQ13939 588 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 LRP8Q14114 963 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 NR6A1Q15406 480 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 PLA2G4EQ3MJ16 856 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 MMEL1Q495T6 779 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 UNC5DQ6UXZ4 953 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 HACD2Q6Y1H2 254 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 FAM83HQ6ZRV2 1179 aaPredicted RBP11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 THOC6Q86W42 341 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 RPLP0P6Q8NHW5 317 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 TSPEARQ8WU66 669 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 ASB12Q8WXK4 309 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 MRGPRX1Q96LB2 322 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 WDR41Q9HAD4 459 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 ZNF490Q9ULM2 529 aaPredicted RBP11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 NCKAP1Q9Y2A7 1128 aa11.14□□□□□ -0.63
SMARCAL1-203ENST00000392128 KMOO15229 486 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 ASGR2P07307 311 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 ACTR3P61158 418 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 BNC2Q6ZN30 1099 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 PDZD3Q86UT5 571 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 MYLK4Q86YV6 388 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 ENDOVQ8N8Q3 282 aaKnown RBP11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 FAM3CQ92520 227 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 HBEGFQ99075 208 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 SERPINI1Q99574 410 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 OSBPL6Q9BZF3 934 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 RNPEPL1Q9HAU8 725 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 SLC2A4RGQ9NR83 387 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 INTS7Q9NVH2 962 aaKnown RBP11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 ZIM2Q9NZV7 527 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 SNX6Q9UNH7 406 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 OR1A2Q9Y585 309 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 TBC1D3DA0A087WVF3 549 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 TBC1D3IA0A087WXS9 549 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 TBC1D3EA0A087X179 549 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 TBC1D3KA0A087X1G2 549 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 SERTM1A2A2V5 107 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 TBC1D3FA6NER0 549 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 PRR23AA6NEV1 266 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 TBC1D3LB9A6J9 549 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 NARSO43776 548 aaKnown RBP11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 TBC1D3HP0C7X1 549 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 NAE1Q13564 534 aa11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 CPSF6Q16630 551 aaKnown RBP eCLIP11.13□□□□□ -0.63
SMARCAL1-203ENST00000392128 AP5B1Q2VPB7 878 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms