RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 UAP1Q16222 522 aaPredicted RBP18.16■□□□□ 0.5
SSU72-203ENST00000378725 CYP2A13Q16696 494 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 PHF19Q5T6S3 580 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 MROH9Q5TGP6 573 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 ARMC6Q6NXE6 501 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 UBE2R2Q712K3 238 aaPredicted RBP18.16■□□□□ 0.5
SSU72-203ENST00000378725 LINC01555Q8NAE3 123 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 OR2L8Q8NGY9 312 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 HMGCLL1Q8TB92 370 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 DENND1AQ8TEH3 1009 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 CAVIN3Q969G5 261 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 UBXN10Q96LJ8 280 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 TGM7Q96PF1 710 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 CD180Q99467 661 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 PKP4Q99569 1192 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 RAB11FIP5Q9BXF6 653 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 STRADBQ9C0K7 418 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 PARVBQ9HBI1 364 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 SPATA7Q9P0W8 599 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.16■□□□□ 0.5
SSU72-203ENST00000378725 ADAMTS6Q9UKP5 1117 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 ANGPTL2Q9UKU9 493 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 IKBKGQ9Y6K9 419 aa18.16■□□□□ 0.5
SSU72-203ENST00000378725 PTPRBP23467 1997 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 EXOC1LA0A1B0GW35 172 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 HGSO14964 777 aaPredicted RBP18.15■□□□□ 0.5
SSU72-203ENST00000378725 PHGDHO43175 533 aaKnown RBP18.15■□□□□ 0.5
SSU72-203ENST00000378725 CHRM5P08912 532 aaPredicted RBP18.15■□□□□ 0.5
SSU72-203ENST00000378725 ERGP11308 486 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 CNTFP26441 200 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 MAP4P27816 1152 aaKnown RBP18.15■□□□□ 0.5
SSU72-203ENST00000378725 KPNA2P52292 529 aaKnown RBP18.15■□□□□ 0.5
SSU72-203ENST00000378725 PRKAA1Q13131 559 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 EIF3IQ13347 325 aaKnown RBP18.15■□□□□ 0.5
SSU72-203ENST00000378725 IRGCQ6NXR0 463 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 ADGRD1Q6QNK2 874 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 PRSS42Q7Z5A4 293 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 CARFQ8N187 725 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 MCOLN3Q8TDD5 553 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 UBLCP1Q8WVY7 318 aaPredicted RBP18.15■□□□□ 0.5
SSU72-203ENST00000378725 IL17FQ96PD4 163 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 NRSN2Q9GZP1 204 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 DERL2Q9GZP9 239 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 ACTR10Q9NZ32 417 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 CIDEBQ9UHD4 219 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 LNPEPQ9UIQ6 1025 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 IKZF3Q9UKT9 509 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 POMT2Q9UKY4 750 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 PDE10AQ9Y233 779 aa18.15■□□□□ 0.5
SSU72-203ENST00000378725 CCDC187A0A096LP49 1063 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 A0A1W2PNU3 283 aaPredicted RBP18.14■□□□□ 0.49
SSU72-203ENST00000378725 PIPSLA2A3N6 862 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 C2orf74A8MZ97 194 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 KIF1CO43896 1103 aaKnown RBP18.14■□□□□ 0.49
SSU72-203ENST00000378725 SLC35E2BP0CK96 405 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 PRDX3P30048 256 aaKnown RBP18.14■□□□□ 0.49
SSU72-203ENST00000378725 HSD17B3P37058 310 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 HSD17B2P37059 387 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 SLC26A3P40879 764 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 FOXK2Q01167 660 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 BMPR2Q13873 1038 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 KIR2DS3Q14952 304 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 ARHGAP19Q14CB8 494 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 C16orf72Q14CZ0 275 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 SNAP47Q5SQN1 464 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 ANKS6Q68DC2 871 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 CCDC91Q7Z6B0 441 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 CMC1Q7Z7K0 106 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 RAB42Q8N4Z0 105 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 RCBTB1Q8NDN9 531 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 WDR36Q8NI36 951 aaKnown RBP18.14■□□□□ 0.49
SSU72-203ENST00000378725 FLVCR1-AS1Q8TAF5 88 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 KLHL6Q8WZ60 621 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 ISL2Q96A47 359 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 OR2A14Q96R47 310 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 CMKLR1Q99788 373 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 CCDC77Q9BR77 488 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 ZMYND15Q9H091 742 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 SPHK1Q9NYA1 384 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 NOVA2Q9UNW9 492 aaKnown RBP18.14■□□□□ 0.49
SSU72-203ENST00000378725 CACNA1AO00555 2505 aa18.14■□□□□ 0.49
SSU72-203ENST00000378725 KRT87PA6NCN2 255 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 A8MU76 341 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 PRICKLE3O43900 615 aaPredicted RBP18.13■□□□□ 0.49
SSU72-203ENST00000378725 KRT38O76015 456 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 CCDC166P0CW27 439 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 CYP2A7P20853 494 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 PEBP1P30086 187 aaKnown RBP18.13■□□□□ 0.49
SSU72-203ENST00000378725 MAGEA12P43365 314 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 RTP5Q14D33 572 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 PHKG1Q16816 387 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 CACHD1Q5VU97 1274 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 FAM92BQ6ZTR7 304 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 TAOK1Q7L7X3 1001 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 RAB11FIP2Q7L804 512 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 CNPY4Q8N129 248 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 AGBL5Q8NDL9 886 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 PRR11Q96HE9 360 aaPredicted RBP18.13■□□□□ 0.49
SSU72-203ENST00000378725 CCDC138Q96M89 665 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 MAP3K3Q99759 626 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms