RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 SELPLGQ14242 412 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 RUNDC3AQ59EK9 446 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 TTC23Q5W5X9 447 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 MSANTD1Q6ZTZ1 278 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 USP45Q70EL2 814 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 CLVS1Q8IUQ0 354 aaPredicted RBP13.63□□□□□ -0.23
HMGCL-203ENST00000374490 LIX1Q8N485 282 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 KLHL23Q8NBE8 558 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 ZNF548Q8NEK5 533 aaPredicted RBP13.63□□□□□ -0.23
HMGCL-203ENST00000374490 FIBINQ8TAL6 211 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 WFDC5Q8TCV5 224 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 FAM122AQ96E09 287 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 AURKBQ96GD4 344 aaPredicted RBP13.63□□□□□ -0.23
HMGCL-203ENST00000374490 SLC32A1Q9H598 525 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 RMND5AQ9H871 391 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 USE1Q9NZ43 259 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 CDH7Q9ULB5 785 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 PCDHGA11Q9Y5H2 935 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 PLXNA4Q9HCM2 1894 aa13.63□□□□□ -0.23
HMGCL-203ENST00000374490 ZNF106Q9H2Y7 1883 aaKnown RBP13.62□□□□□ -0.23
HMGCL-203ENST00000374490 A0A0U1RQS6 177 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 ELOVL7A1L3X0 281 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 PABPN1LA6NDY0 278 aaKnown RBP13.62□□□□□ -0.23
HMGCL-203ENST00000374490 NPIPB8E9PQR5 432 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 K7ERQ8 282 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 UPK1AO00322 258 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 SLC16A5O15375 505 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 DFNA5O60443 496 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 NOL3O60936 208 aaKnown RBP13.62□□□□□ -0.23
HMGCL-203ENST00000374490 SEC22BO75396 215 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 RSL1D1O76021 490 aaKnown RBP13.62□□□□□ -0.23
HMGCL-203ENST00000374490 SEC24DO94855 1032 aaPredicted RBP13.62□□□□□ -0.23
HMGCL-203ENST00000374490 CLDN9O95484 217 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 SNAP29O95721 258 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 PGRP06401 933 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 ADH1AP07327 375 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 RETP07949 1114 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 MPC1LP0DKB6 136 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 PRPH2P23942 346 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 PCSK6P29122 969 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 CTNNB1P35222 781 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 PLA2G5P39877 138 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 NRIP1P48552 1158 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 SP140Q13342 867 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 PHKG1Q16816 387 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 FAM174BQ3ZCQ3 159 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 RBM48Q5RL73 367 aaKnown RBP13.62□□□□□ -0.23
HMGCL-203ENST00000374490 TPRG1Q6ZUI0 275 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 HTR3DQ70Z44 454 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 GPR180Q86V85 440 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 ZDHHC13Q8IUH4 622 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 CROCCP3Q8IVE0 287 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 MICU2Q8IYU8 434 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 APCDD1Q8J025 514 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 CLEC4FQ8N1N0 589 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 ARL14EPQ8N8R7 260 aaPredicted RBP13.62□□□□□ -0.23
HMGCL-203ENST00000374490 OR2AP1Q8NGE2 309 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 MRPS31Q92665 395 aaKnown RBP13.62□□□□□ -0.23
HMGCL-203ENST00000374490 TMBIM1Q969X1 311 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 ISOC1Q96CN7 298 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 COPS8Q99627 209 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 THUMPD3Q9BV44 507 aaKnown RBP13.62□□□□□ -0.23
HMGCL-203ENST00000374490 NTN4Q9HB63 628 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 VAPAQ9P0L0 249 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 TSR3Q9UJK0 312 aaKnown RBP13.62□□□□□ -0.23
HMGCL-203ENST00000374490 SNX6Q9UNH7 406 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 USP22Q9UPT9 525 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 MAN2B2Q9Y2E5 1009 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 PPIL1Q9Y3C6 166 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 SH3BP1Q9Y3L3 701 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 NEUROG3Q9Y4Z2 214 aa13.62□□□□□ -0.23
HMGCL-203ENST00000374490 A0A096LPI6 279 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 SERTM1A2A2V5 107 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 KLHL33A6NCF5 533 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 LOC730098B7Z3J9 87 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 LILRB3O75022 631 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 CXCL14O95715 111 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 CDK4P11802 303 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 JUNBP17275 347 aaPredicted RBP13.61□□□□□ -0.23
HMGCL-203ENST00000374490 PFKLP17858 780 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 DCKP27707 260 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 MTHFRP42898 656 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 CLDN8P56748 225 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 ERVK-21P61565 698 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 SLC7A9P82251 487 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 LMAN2Q12907 356 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 TOP3AQ13472 1001 aaPredicted RBP13.61□□□□□ -0.23
HMGCL-203ENST00000374490 PLEKHG6Q3KR16 790 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 USP39Q53GS9 565 aaKnown RBP13.61□□□□□ -0.23
HMGCL-203ENST00000374490 ZNF773Q6PK81 442 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 EP400NLQ6ZTU2 488 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 CCDC149Q6ZUS6 474 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 SPRED2Q7Z698 418 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 RGL4Q8IZJ4 473 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 SP7Q8TDD2 431 aaPredicted RBP13.61□□□□□ -0.23
HMGCL-203ENST00000374490 GAB3Q8WWW8 586 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 FIG4Q92562 907 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 FAM162AQ96A26 154 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 SLC47A1Q96FL8 570 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 ITCHQ96J02 903 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms