RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ZNF789Q5FWF6 425 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 ZC3H12BQ5HYM0 836 aaKnown RBP11.3□□□□□ -0.6
USF1-201ENST00000368019 FGD3Q5JSP0 725 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 MSANTD2Q6P1R3 559 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 ARHGAP36Q6ZRI8 547 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 NCCRP1Q6ZVX7 275 aaPredicted RBP11.3□□□□□ -0.6
USF1-201ENST00000368019 ZFAND4Q86XD8 727 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 ANKRD13BQ86YJ7 626 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 C8orf59Q8N0T1 100 aaPredicted RBP11.3□□□□□ -0.6
USF1-201ENST00000368019 PARP8Q8N3A8 854 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 CAMKK1Q8N5S9 505 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 OR8J3Q8NGG0 315 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 SNX19Q92543 992 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 RNF34Q969K3 372 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 ZNF566Q969W8 418 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 BIRC7Q96CA5 298 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 ZNF419Q96HQ0 510 aaPredicted RBP11.3□□□□□ -0.6
USF1-201ENST00000368019 PHF12Q96QT6 1004 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 SLC39A3Q9BRY0 314 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 UGT2B28Q9BY64 529 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 ARRDC1-AS1Q9H2J1 176 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 RAD21L1Q9H4I0 556 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 ANKHQ9HCJ1 492 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 HMG20AQ9NP66 347 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 RXFP3Q9NSD7 469 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 COMMD8Q9NX08 183 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 UXTQ9UBK9 157 aaPredicted RBP11.3□□□□□ -0.6
USF1-201ENST00000368019 SUN2Q9UH99 717 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 VPS9D1Q9Y2B5 631 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 PCDHGA11Q9Y5H2 935 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 SNX10Q9Y5X0 201 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 GON4LQ3T8J9 2241 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 PI4KAP42356 2102 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 CLDN25C9JDP6 229 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 K7EPI3 171 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 LDB2O43679 373 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 SNX2O60749 519 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 SLC22A3O75751 556 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 ALPLP05186 524 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 ANXA6P08133 673 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 CCDC159P0C7I6 412 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 TCF3P15923 654 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 CRHBPP24387 322 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 HRH2P25021 359 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 MAGEA11P43364 429 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 CHRNA4P43681 627 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 OXCT1P55809 520 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 PRKG2Q13237 762 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 GRB7Q14451 532 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 NR1D2Q14995 579 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 ACOX1Q15067 660 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 OXA1LQ15070 435 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 EML3Q32P44 896 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 ANKDD1AQ495B1 522 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 FBXO43Q4G163 708 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 FAM98BQ52LJ0 330 aaKnown RBP11.29□□□□□ -0.6
USF1-201ENST00000368019 PITRM1Q5JRX3 1037 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 XAF1Q6GPH4 301 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 FBXO39Q8N4B4 442 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 MAGEE2Q8TD90 523 aaPredicted RBP11.29□□□□□ -0.6
USF1-201ENST00000368019 MUL1Q969V5 352 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 MYLPFQ96A32 169 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 FKBP10Q96AY3 582 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 TBC1D20Q96BZ9 403 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 SDCCAG3Q96C92 435 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 FUBP3Q96I24 572 aaKnown RBP eCLIP11.29□□□□□ -0.6
USF1-201ENST00000368019 CCDC138Q96M89 665 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 SERPINB11Q96P15 392 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 P2RY13Q9BPV8 354 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 NEURL2Q9BR09 285 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 CHID1Q9BWS9 393 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 TUBB1Q9H4B7 451 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 RETREG1Q9H6L5 497 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 GORASP2Q9H8Y8 452 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 NANOGQ9H9S0 305 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 TMEM248Q9NWD8 314 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 SCHIP1Q9P0W5 487 aaPredicted RBP11.29□□□□□ -0.6
USF1-201ENST00000368019 EGFL7Q9UHF1 273 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 SFMBT1Q9UHJ3 866 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 ENPP5Q9UJA9 477 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 ZNF711Q9Y462 761 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 PCDHGA5Q9Y5G8 931 aa11.29□□□□□ -0.6
USF1-201ENST00000368019 HEMK1Q9Y5R4 338 aaPredicted RBP11.29□□□□□ -0.6
USF1-201ENST00000368019 ATP6AP2A0A1C7CYW4 349 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 FAM149AA5PLN7 773 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 ASPDHA6ND91 283 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 E9PAM4 449 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 BOLA2-SMG1P6H3BVE0 249 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 UPK1AO00322 258 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 SUPT3HO75486 399 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 ATP6AP2O75787 350 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 SEC24DO94855 1032 aaPredicted RBP11.28□□□□□ -0.6
USF1-201ENST00000368019 SNAP29O95721 258 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 FUCA1P04066 466 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 MMP2P08253 660 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 ATXN1LP0C7T5 689 aaKnown RBP11.28□□□□□ -0.6
USF1-201ENST00000368019 GGT1P19440 569 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 CD247P20963 164 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 MATN1P21941 496 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 RYKP34925 604 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms