RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 TMPRSS11BQ86T26 416 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 APPL2Q8NEU8 664 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 LPGAT1Q92604 370 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 ZNF689Q96CS4 500 aaPredicted RBP3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 CCDC34Q96HJ3 373 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 SYT15Q9BQS2 421 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 MXD3Q9BW11 206 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 OPA3Q9H6K4 179 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 SERINC1Q9NRX5 453 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 PSD3Q9NYI0 1048 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 PRSS21Q9Y6M0 314 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 PCDH11YQ9BZA8 1340 aa3.95□□□□□ -1.78
RNU4-28P-201ENST00000364739 ANKRD18BA2A2Z9 1011 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 MSGN1A6NI15 193 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 TSPAN9O75954 239 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 OR2T7P0C7T2 308 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 HSPA8P11142 646 aaKnown RBP3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 SAT1P21673 171 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 EIF2DP41214 584 aaKnown RBP3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 GCNT1Q02742 428 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 CUL4AQ13619 759 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 NR1D2Q14995 579 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 TAF13Q15543 124 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 KRT71Q3SY84 523 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 PSRC1Q6PGN9 363 aaPredicted RBP3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 STXBP4Q6ZWJ1 553 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 LACC1Q8IV20 430 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 RPAP2Q8IXW5 612 aaPredicted RBP3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 GUF1Q8N442 669 aaKnown RBP3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 ZNF614Q8N883 585 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 PPFIBP2Q8ND30 876 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 PAPD5Q8NDF8 572 aaKnown RBP3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 MCUQ8NE86 351 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 DBF4BQ8NFT6 615 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 URM1Q9BTM9 101 aaKnown RBP3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 TRIM15Q9C019 465 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 SHARPINQ9H0F6 387 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 P2RY12Q9H244 342 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 Q9N2K0 584 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 LRWD1Q9UFC0 647 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 ANGPTL3Q9Y5C1 460 aa3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 ZNF644Q9H582 1327 aaPredicted RBP3.94□□□□□ -1.78
RNU4-28P-201ENST00000364739 A0A0J9YWU9 116 aa3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 TSPAN1O60635 241 aa3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 BEST1O76090 585 aa3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 SLC6A6P31641 620 aa3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 MATR3P43243 847 aaKnown RBP eCLIP3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 EPS8Q12929 822 aa3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 TEAD2Q15562 447 aa3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 PHLDA1Q8WV24 401 aaPredicted RBP3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 PTERQ96BW5 349 aa3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 NXNL1Q96CM4 212 aa3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 MOCOSQ96EN8 888 aa3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 RSRC1Q96IZ7 334 aaKnown RBP3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 CABLES2Q9BTV7 478 aa3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 CLEC7AQ9BXN2 247 aa3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 WBP11Q9Y2W2 641 aaKnown RBP3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 GRIP1Q9Y3R0 1128 aa3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 PCNX3Q9H6A9 2034 aa3.93□□□□□ -1.78
RNU4-28P-201ENST00000364739 TMEM221A6NGB7 291 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 KLF11O14901 512 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 IGHV4-31P0DP07 118 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 KRT5P13647 590 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 CA6P23280 308 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 SLC9A3P48764 834 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 EIF5P55010 431 aaKnown RBP3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 HNRNPKP61978 463 aaKnown RBP eCLIP3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 LMOD3Q0VAK6 560 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 TAF10Q12962 218 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 STK4Q13043 487 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 HERC3Q15034 1050 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 NTRK2Q16620 822 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 HYIQ5T013 277 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 GTSCR1Q86UQ5 136 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 ZNF440Q8IYI8 595 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 KIRREL3Q8IZU9 778 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 RAB42Q8N4Z0 105 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 EXD1Q8NHP7 514 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 AZIN2Q96A70 460 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 JAKMIP2Q96AA8 810 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 CENPTQ96BT3 561 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 TMCO6Q96DC7 493 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 MS4A10Q96PG2 267 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 ABHD1Q96SE0 405 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 PIGQQ9BRB3 760 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 TEX12Q9BXU0 123 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 OR2B2Q9GZK3 357 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 EQTNQ9NQ60 294 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 GIMAP4Q9NUV9 329 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 P4HTMQ9NXG6 502 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 EPHA6Q9UF33 1036 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 PADI2Q9Y2J8 665 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 PPP2R2CQ9Y2T4 447 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 MMP24Q9Y5R2 645 aa3.92□□□□□ -1.78
RNU4-28P-201ENST00000364739 IGLV7-46A0A075B6I9 117 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 E9PQ18 207 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 SLCO1B7G3V0H7 640 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 RNASEH1O60930 286 aaKnown RBP3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 KHDRBS3O75525 346 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms