RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 ERVK-8P63133 956 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 CAND1Q86VP6 1230 aaKnown RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 CILP2Q8IUL8 1156 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 ZC3H7AQ8IWR0 971 aaKnown RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 METTL21AQ8WXB1 218 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 KIAA1191Q96A73 305 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 LMLNQ96KR4 655 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 CWH43Q9H720 699 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 ZNF229Q9UJW7 825 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 ADAM30Q9UKF2 790 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 A0A1W2PQU0 124 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 KLHL33A6NCF5 533 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 STX16-NPEPL1H3BU86 382 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 CCL22O00626 93 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 STX16O14662 325 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 PRMT3O60678 531 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 CNTN5O94779 1100 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 OR4F21O95013 312 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 SRPRAP08240 638 aaKnown RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 ANXA4P09525 319 aaPredicted RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 CREB1P16220 341 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 MYL12AP19105 171 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 NOS3P29474 1203 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 PRKAG1P54619 331 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 DNAJB13P59910 316 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 NRG1Q02297 640 aaPredicted RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 SP140Q13342 867 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 KCTD19Q17RG1 926 aaPredicted RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 ABRAXAS1Q6UWZ7 409 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 LYSMD3Q7Z3D4 306 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 SFRP1Q8N474 314 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 OR2T34Q8NGX1 318 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 OR2T3Q8NH03 318 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 LCN9Q8WX39 176 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 EDEM2Q9BV94 578 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 TMEM245Q9H330 911 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 CCNB1IP1Q9NPC3 277 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 RIMKLBQ9ULI2 386 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 TIMM22Q9Y584 194 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 CXorf49A8MYA2 514 aaPredicted RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 AP3D1O14617 1153 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 LIN7AO14910 233 aaPredicted RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 MID1O15344 667 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 LILRB3O75022 631 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 ERAL1O75616 437 aaKnown RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 KRT36O76013 467 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 BEST1O76090 585 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 CST1P01037 141 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 ALPIP09923 528 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 IMPDH2P12268 514 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 JAK1P23458 1154 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 SLC6A11P48066 632 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 STK19P49842 368 aaPredicted RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 CHN2P52757 468 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 CST6Q15828 149 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 TMEM135Q86UB9 458 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 DPP10Q8N608 796 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 PHF10Q8WUB8 498 aaKnown RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 C10orf82Q8WW14 230 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 TRIB3Q96RU7 358 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 CCM2Q9BSQ5 444 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 ATG10Q9H0Y0 220 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 RIBC2Q9H4K1 309 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 ZNF334Q9HCZ1 680 aaPredicted RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 MARCH5Q9NX47 278 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 CALML5Q9NZT1 146 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 ELOVL7A1L3X0 281 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 BCAT2O15382 392 aaPredicted RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 CYP7B1O75881 506 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 ATP1B2P14415 290 aaPredicted RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 CD6P30203 668 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 SERPINB1P30740 379 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 ST13P50502 369 aaKnown RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 SIGLEC14Q08ET2 396 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 KCNC3Q14003 757 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 CCDC142Q17RM4 750 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 MSS51Q4VC12 460 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 ASTLQ6HA08 431 aaPredicted RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 GLYATQ6IB77 296 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 C14orf80Q86SX3 495 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 HIPK1Q86Z02 1210 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 MAGEE2Q8TD90 523 aaPredicted RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 COL26A1Q96A83 441 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 NPAS2Q99743 824 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 ACAT2Q9BWD1 397 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 S100A14Q9HCY8 104 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 HPS4Q9NQG7 708 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 APOBEC3BQ9UH17 382 aaKnown RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 FAM234BA2RU67 622 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 TTC34A8MYJ7 566 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 ZBTB42B2RXF5 422 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 PEX12O00623 359 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 ABLIM1O14639 778 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 ARHGEF9O43307 516 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 NARSO43776 548 aaKnown RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 SLC35G6P0C7Q6 338 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 CCNYL3P0C7X3 344 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 HOXD8P13378 290 aaPredicted RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 PTX3P26022 381 aaPredicted RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 WNT7BP56706 349 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms