RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 GNG14A0A1W2PPG7 69 aa8.96□□□□□ -0.98
UPF2-202ENST00000357604 WDR91A4D1P6 747 aa8.96□□□□□ -0.98
UPF2-202ENST00000357604 OR1F1O43749 312 aa8.96□□□□□ -0.98
UPF2-202ENST00000357604 FBLP22087 321 aaKnown RBP8.96□□□□□ -0.98
UPF2-202ENST00000357604 FOXN2P32314 431 aa8.96□□□□□ -0.98
UPF2-202ENST00000357604 DRD3P35462 400 aa8.96□□□□□ -0.98
UPF2-202ENST00000357604 ALDH18A1P54886 795 aaKnown RBP8.96□□□□□ -0.98
UPF2-202ENST00000357604 SRSF5Q13243 272 aaKnown RBP8.96□□□□□ -0.98
UPF2-202ENST00000357604 PFKFB4Q16877 469 aa8.96□□□□□ -0.98
UPF2-202ENST00000357604 ICE2Q659A1 982 aa8.96□□□□□ -0.98
UPF2-202ENST00000357604 TMEM135Q86UB9 458 aa8.96□□□□□ -0.98
UPF2-202ENST00000357604 GATAD2AQ86YP4 633 aa8.96□□□□□ -0.98
UPF2-202ENST00000357604 CARFQ8N187 725 aa8.96□□□□□ -0.98
UPF2-202ENST00000357604 KYQ8NBH2 561 aa8.96□□□□□ -0.98
UPF2-202ENST00000357604 OR4C6Q8NH72 309 aa8.96□□□□□ -0.98
UPF2-202ENST00000357604 KCTD4Q8WVF5 259 aa8.96□□□□□ -0.98
UPF2-202ENST00000357604 SLC5A11Q8WWX8 675 aa8.96□□□□□ -0.98
UPF2-202ENST00000357604 TEX264Q9Y6I9 313 aa8.96□□□□□ -0.98
UPF2-202ENST00000357604 TCRBV7S3A2A0A539 114 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 H0Y8X5 98 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 TRIM13O60858 407 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 KERAO60938 352 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 NIPSNAP2O75323 286 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 TYRP1P17643 537 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 IFNA8P32881 189 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 CDC16Q13042 620 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 ARHGAP40Q5TG30 622 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 WASH2PQ6VEQ5 465 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 DENND6AQ8IWF6 608 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 C4orf33Q8N1A6 199 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 ESX1Q8N693 406 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 SUN3Q8TAQ9 357 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 AENQ8WTP8 325 aaKnown RBP8.95□□□□□ -0.98
UPF2-202ENST00000357604 WASH6PQ9NQA3 447 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 ACTR10Q9NZ32 417 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 LILRA5A6NI73 299 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 POLR3GO15318 223 aaPredicted RBP8.95□□□□□ -0.98
UPF2-202ENST00000357604 BIRC5O15392 142 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 SIGLEC6O43699 453 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 ITGA1P56199 1179 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 NFE2L1Q14494 772 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 GRM7Q14831 915 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 TYSND1Q2T9J0 566 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 MUM1Q2TAK8 710 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 ATP6AP1LQ52LC2 224 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 R3HCC1LQ7Z5L2 792 aaKnown RBP8.95□□□□□ -0.98
UPF2-202ENST00000357604 TDRPQ86YL5 185 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 SLC22A15Q8IZD6 547 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 IL22RA1Q8N6P7 574 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 SIGLEC10Q96LC7 697 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 TMEM168Q9H0V1 697 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 C3orf14Q9HBI5 128 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 HHATLQ9HCP6 504 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 LYARQ9NX58 379 aaKnown RBP8.95□□□□□ -0.98
UPF2-202ENST00000357604 GBF1Q92538 1859 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 TMEM150CB9EJG8 249 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 YY2O15391 372 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 SERPINE1P05121 402 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 NUDT17P0C025 328 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 FDXRP22570 491 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 HNF4AP41235 474 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 SEPHS1P49903 392 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 PKNOX1P55347 436 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 HPCAP84074 193 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 GTF2H2Q13888 395 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 FZD2Q14332 565 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 HERC3Q15034 1050 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 GAB4Q2WGN9 574 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 GTF2H2CQ6P1K8 395 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 CAND1Q86VP6 1230 aaKnown RBP8.95□□□□□ -0.98
UPF2-202ENST00000357604 TMEM145Q8NBT3 493 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 OR2L8Q8NGY9 312 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 EPS8L3Q8TE67 593 aaKnown RBP8.95□□□□□ -0.98
UPF2-202ENST00000357604 LINC00615Q96LM1 132 aaPredicted RBP8.95□□□□□ -0.98
UPF2-202ENST00000357604 LRRC61Q9BV99 259 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 RAD21L1Q9H4I0 556 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 IL21RQ9HBE5 538 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 MID1IP1Q9NPA3 183 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 ATAD3AQ9NVI7 634 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 ZNF638Q14966 1978 aaKnown RBP8.95□□□□□ -0.98
UPF2-202ENST00000357604 IFNA16P05015 189 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 ZNHIT3Q15649 155 aaPredicted RBP8.95□□□□□ -0.98
UPF2-202ENST00000357604 SLC5A12Q1EHB4 618 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 RSPO4Q2I0M5 234 aaPredicted RBP8.95□□□□□ -0.98
UPF2-202ENST00000357604 ADGRD1Q6QNK2 874 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 SZRD1Q7Z422 152 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 THOC6Q86W42 341 aaKnown RBP8.95□□□□□ -0.98
UPF2-202ENST00000357604 PLA2G15Q8NCC3 412 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 CEP70Q8NHQ1 597 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 RIN3Q8TB24 985 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 OR1E3Q8WZA6 343 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 RABEP2Q9H5N1 569 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 GRHL1Q9NZI5 618 aa8.95□□□□□ -0.98
UPF2-202ENST00000357604 HS6ST1O60243 411 aa8.94□□□□□ -0.98
UPF2-202ENST00000357604 ZBTB11O95625 1053 aaPredicted RBP8.94□□□□□ -0.98
UPF2-202ENST00000357604 CPNE6O95741 557 aa8.94□□□□□ -0.98
UPF2-202ENST00000357604 GP1BAP07359 652 aa8.94□□□□□ -0.98
UPF2-202ENST00000357604 GRIA1P42261 906 aa8.94□□□□□ -0.98
UPF2-202ENST00000357604 RXRGP48443 463 aa8.94□□□□□ -0.98
UPF2-202ENST00000357604 PFN3P60673 137 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms