RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 AGTRAPQ6RW13 159 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 EPGNQ6UW88 154 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 GPRIN3Q6ZVF9 776 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 SYVN1Q86TM6 617 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 PHC3Q8NDX5 983 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 MAPK15Q8TD08 544 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 ATP6V1E2Q96A05 226 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 PYCR2Q96C36 320 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 INSM2Q96T92 566 aaPredicted RBP15.17■□□□□ 0.02
CTSA-202ENST00000354880 NUF2Q9BZD4 464 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 DUSP15Q9H1R2 295 aaPredicted RBP15.17■□□□□ 0.02
CTSA-202ENST00000354880 ZNF225Q9UK10 706 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 LAMA1P25391 3075 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 TRPC5OSA6NMA1 111 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 OR7A17O14581 309 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 DIAPH2O60879 1101 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 KATNA1O75449 491 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 DCTN3O75935 186 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 AK4P27144 223 aaPredicted RBP15.17■□□□□ 0.02
CTSA-202ENST00000354880 ARL1P40616 181 aaPredicted RBP15.17■□□□□ 0.02
CTSA-202ENST00000354880 FNTBP49356 437 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 IDH3AP50213 366 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 CCNG1P51959 295 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 IFT88Q13099 833 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 EIF2B5Q13144 721 aaKnown RBP15.17■□□□□ 0.02
CTSA-202ENST00000354880 CLCA4Q14CN2 919 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 C6orf89Q6UWU4 347 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 IQCHQ86VS3 1027 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 SPATS2Q86XZ4 545 aaKnown RBP15.17■□□□□ 0.02
CTSA-202ENST00000354880 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.17■□□□□ 0.02
CTSA-202ENST00000354880 TBC1D21Q8IYX1 336 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 ZNF480Q8WV37 535 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 RILPQ96NA2 401 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 MIR1-1HGQ9H1L0 117 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 TRIT1Q9H3H1 467 aaKnown RBP15.17■□□□□ 0.02
CTSA-202ENST00000354880 PRDM8Q9NQV8 689 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 HEY2Q9UBP5 337 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 APOBEC2Q9Y235 224 aaKnown RBP15.17■□□□□ 0.02
CTSA-202ENST00000354880 SLC22A14Q9Y267 594 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 A0A1W2PR77 199 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 SKAP2O75563 359 aaPredicted RBP15.16■□□□□ 0.02
CTSA-202ENST00000354880 CRCPO75575 148 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 JUNP05412 331 aaKnown RBP15.16■□□□□ 0.02
CTSA-202ENST00000354880 TDGF1P13385 188 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 ACTR1BP42025 376 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 FOXA1P55317 472 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 ACTR1AP61163 376 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 ILF3Q12906 894 aaKnown RBP eCLIP15.16■□□□□ 0.023e-8■■■□□ 16.1
CTSA-202ENST00000354880 TRAF3Q13114 568 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 NAE1Q13564 534 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 TCEA2Q15560 299 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 UGT3A2Q3SY77 523 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 SLC9B1Q4ZJI4 515 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 KANK2Q63ZY3 851 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 TRPM8Q7Z2W7 1104 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 WDR5BQ86VZ2 330 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 PARGQ86W56 976 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 C1orf210Q8IVY1 113 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 SYTL1Q8IYJ3 562 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 DCBLD1Q8N8Z6 715 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 OR56A3Q8NH54 315 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 CCL4L1Q8NHW4 92 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 DNASE2BQ8WZ79 361 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 SKA1Q96BD8 255 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 CDK15Q96Q40 435 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 KCNA7Q96RP8 456 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 TM9SF3Q9HD45 589 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 DNAJC11Q9NVH1 559 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 INTS7Q9NVH2 962 aaKnown RBP15.16■□□□□ 0.02
CTSA-202ENST00000354880 TBC1D29Q9UFV1 150 aa15.16■□□□□ 0.02
CTSA-202ENST00000354880 TDRKHQ9Y2W6 561 aaKnown RBP15.16■□□□□ 0.02
CTSA-202ENST00000354880 HGSO14964 777 aaPredicted RBP15.15■□□□□ 0.02
CTSA-202ENST00000354880 OR4F21O95013 312 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 WNT1P04628 370 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 ITPKAP23677 461 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 SERPINB3P29508 390 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 HALP42357 657 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 ERVPABLB-1P60509 514 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 BTKQ06187 659 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 PRKG2Q13237 762 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 GRB7Q14451 532 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 LETMD1Q6P1Q0 360 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 DUS1LQ6P1R4 473 aaKnown RBP15.15■□□□□ 0.02
CTSA-202ENST00000354880 SLC30A9Q6PML9 568 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 ABRAXAS1Q6UWZ7 409 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 WASH2PQ6VEQ5 465 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 MILR1Q7Z6M3 343 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 KLHDC8AQ8IYD2 350 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 RGL4Q8IZJ4 473 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 SNX31Q8N9S9 440 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 PPFIBP2Q8ND30 876 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 OR4F6Q8NGB9 312 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 C1orf216Q8TAB5 229 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 MED8Q96G25 268 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 PPP1R36Q96LQ0 422 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 LRRC37BQ96QE4 947 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 FERD3LQ96RJ6 166 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 NTMT1Q9BV86 223 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 WASH6PQ9NQA3 447 aa15.15■□□□□ 0.02
CTSA-202ENST00000354880 ABCF3Q9NUQ8 709 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms