RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 ACADLP28330 430 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 BDKRB1P46663 353 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 EMX2Q04743 252 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 SMAD2Q15796 467 aaKnown RBP16.29■□□□□ 0.2
CLCF1-201ENST00000312438 MMEL1Q495T6 779 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 C6orf163Q5TEZ5 329 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 PGM2L1Q6PCE3 622 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 MAGEC3Q8TD91 643 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 FOXJ1Q92949 421 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 USP7Q93009 1102 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 CLPTM1LQ96KA5 538 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 PPP3R2Q96LZ3 170 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 SLC2A4RGQ9NR83 387 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 INTS7Q9NVH2 962 aaKnown RBP16.29■□□□□ 0.2
CLCF1-201ENST00000312438 AIG1Q9NVV5 245 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 ZNHIT2Q9UHR6 403 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 MMP17Q9ULZ9 603 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 PRKAB1Q9Y478 270 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 PIKFYVEQ9Y2I7 2098 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 MANBAO00462 879 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 FFAR3O14843 346 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 LSM1O15116 133 aaKnown RBP16.28■□□□□ 0.2
CLCF1-201ENST00000312438 GPR42O15529 346 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 UGDHO60701 494 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 SLC16A8O95907 504 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 MYCLP1P12525 358 aaPredicted RBP16.28■□□□□ 0.2
CLCF1-201ENST00000312438 DIO3P55073 304 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 TBL3Q12788 808 aaKnown RBP16.28■□□□□ 0.2
CLCF1-201ENST00000312438 NAE1Q13564 534 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 TDGQ13569 410 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 CPSF6Q16630 551 aaKnown RBP eCLIP16.28■□□□□ 0.2
CLCF1-201ENST00000312438 SMU1Q2TAY7 513 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 PLA2G4EQ3MJ16 856 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 CCSMST1Q4G0I0 132 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 TMEM92Q6UXU6 159 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 NET1Q7Z628 596 aaPredicted RBP16.28■□□□□ 0.2
CLCF1-201ENST00000312438 THOC6Q86W42 341 aaKnown RBP16.28■□□□□ 0.2
CLCF1-201ENST00000312438 FUNDC1Q8IVP5 155 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 OXR1Q8N573 874 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 FNDC5Q8NAU1 212 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 OR56A3Q8NH54 315 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 OR52A5Q9H2C5 316 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 TMEM45AQ9NWC5 275 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 SLC23A2Q9UGH3 650 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 SLC7A8Q9UHI5 535 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 ZNF490Q9ULM2 529 aaPredicted RBP16.28■□□□□ 0.2
CLCF1-201ENST00000312438 SNX6Q9UNH7 406 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 CCL27Q9Y4X3 112 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 PCYT1BQ9Y5K3 369 aaPredicted RBP16.28■□□□□ 0.2
CLCF1-201ENST00000312438 CKAP5Q14008 2032 aa16.28■□□□□ 0.2
CLCF1-201ENST00000312438 KRT87PA6NCN2 255 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 NRP2O60462 931 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 IMPA1P29218 277 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 NR6A1Q15406 480 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 AP5B1Q2VPB7 878 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 LIPJQ5W064 366 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 METRNLQ641Q3 311 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 UNC5DQ6UXZ4 953 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 FAM83HQ6ZRV2 1179 aaPredicted RBP16.27■□□□□ 0.2
CLCF1-201ENST00000312438 PGAM4Q8N0Y7 254 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 OR9I1Q8NGQ6 314 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 TSPEARQ8WU66 669 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 HLA-CQ95604 372 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 NPAS2Q99743 824 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 ZDHHC5Q9C0B5 715 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 BRINP2Q9C0B6 783 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 RMI1Q9H9A7 625 aa16.27■□□□□ 0.2
CLCF1-201ENST00000312438 PRPF19Q9UMS4 504 aaKnown RBP16.27■□□□□ 0.2
CLCF1-201ENST00000312438 SOX1O00570 391 aaPredicted RBP16.26■□□□□ 0.19
CLCF1-201ENST00000312438 MAN2B1O00754 1011 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 CCND1P24385 295 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 MAT2AP31153 395 aaKnown RBP16.26■□□□□ 0.19
CLCF1-201ENST00000312438 PCDH1Q08174 1060 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 CHIT1Q13231 466 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 PDCD4Q53EL6 469 aaKnown RBP16.26■□□□□ 0.19
CLCF1-201ENST00000312438 KIAA1324Q6UXG2 1013 aaKnown RBP16.26■□□□□ 0.19
CLCF1-201ENST00000312438 FBXW8Q8N3Y1 598 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 OR9A1PQ8NGU1 263 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 WDR60Q8WVS4 1066 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 MED8Q96G25 268 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 HBEGFQ99075 208 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 SERPINI1Q99574 410 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 SZT2Q5T011 3432 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 KCNE1BA0A087WTH5 132 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 BBIP1A8MTZ0 92 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 FBP2O00757 339 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 SLC31A1O15431 190 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 ENTPD5O75356 428 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 NDUFV2P19404 249 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 CD72P21854 359 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 HALP42357 657 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 GNPDA1P46926 289 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 NME5P56597 212 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 IRF8Q02556 426 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 MAD2L1Q13257 205 aaPredicted RBP16.26■□□□□ 0.19
CLCF1-201ENST00000312438 KPNB1Q14974 876 aaKnown RBP16.26■□□□□ 0.19
CLCF1-201ENST00000312438 IMPG1Q17R60 797 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 TRMT5Q32P41 509 aaKnown RBP16.26■□□□□ 0.19
CLCF1-201ENST00000312438 SGO1Q5FBB7 561 aa16.26■□□□□ 0.19
CLCF1-201ENST00000312438 PDZD3Q86UT5 571 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms