RNA–Protein interactions for RNA: ENST00000293683.9

PDE4A-201, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-201ENST00000293683 GKN1Q9NS71 199 aa16.93■□□□□ 0.3
PDE4A-201ENST00000293683 WWOXQ9NZC7 414 aa16.93■□□□□ 0.3
PDE4A-201ENST00000293683 IL17CQ9P0M4 197 aa16.93■□□□□ 0.3
PDE4A-201ENST00000293683 PCDHGA10Q9Y5H3 936 aa16.93■□□□□ 0.3
PDE4A-201ENST00000293683 KPNA4O00629 521 aaPredicted RBP16.92■□□□□ 0.3
PDE4A-201ENST00000293683 ULK1O75385 1050 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 NADKO95544 446 aaPredicted RBP16.92■□□□□ 0.3
PDE4A-201ENST00000293683 BMP4P12644 408 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 BCKDHAP12694 445 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 PAX3P23760 479 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 IGFBP5P24593 272 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 GNPDA1P46926 289 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 MASP1P48740 699 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 GZMMP51124 257 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 RNF219Q5W0B1 726 aaPredicted RBP16.92■□□□□ 0.3
PDE4A-201ENST00000293683 SERPINA9Q86WD7 417 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 FAM120BQ96EK7 910 aaKnown RBP16.92■□□□□ 0.3
PDE4A-201ENST00000293683 NACA2Q9H009 215 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 TNKS2Q9H2K2 1166 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 SERHLQ9NQF3 203 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 SACM1LQ9NTJ5 587 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 OPTCQ9UBM4 332 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 PKP3Q9Y446 797 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 IL6P05231 212 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 C5orf22Q49AR2 442 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 PAGE2BQ5JRK9 111 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 CADM3Q8N126 398 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 MFSD4AQ8N468 514 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 RPL3LQ92901 407 aaKnown RBP16.92■□□□□ 0.3
PDE4A-201ENST00000293683 WBP2Q969T9 261 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 PDLIM5Q96HC4 596 aaKnown RBP16.92■□□□□ 0.3
PDE4A-201ENST00000293683 CPPED1Q9BRF8 314 aaPredicted RBP16.92■□□□□ 0.3
PDE4A-201ENST00000293683 GPR63Q9BZJ6 419 aa16.92■□□□□ 0.3
PDE4A-201ENST00000293683 TRIT1Q9H3H1 467 aaKnown RBP16.92■□□□□ 0.3
PDE4A-201ENST00000293683 H7C0S8 307 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 SLC16A6O15403 523 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 PRAMEF1O95521 474 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 ZNF682O95780 498 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 FADS2O95864 444 aaKnown RBP16.91■□□□□ 0.3
PDE4A-201ENST00000293683 ALDH2P05091 517 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 RETP07949 1114 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 IRF1P10914 325 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 ATF6P18850 670 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 TACR1P25103 407 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 CLK3P49761 638 aaKnown RBP16.91■□□□□ 0.3
PDE4A-201ENST00000293683 CACNG1Q06432 222 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 GTF2H3Q13889 308 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 GBX1Q14549 363 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 NPTX1Q15818 432 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 CPSF6Q16630 551 aaKnown RBP eCLIP16.91■□□□□ 0.3
PDE4A-201ENST00000293683 CACHD1Q5VU97 1274 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 CPZQ66K79 652 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 LRRC8DQ7L1W4 858 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 RORBQ92753 470 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 UBE2FQ969M7 185 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 HERC2P3Q9BVR0 1158 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 CLPBQ9H078 707 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 C1orf109Q9NX04 203 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 LAMA2P24043 3122 aaKnown RBP16.91■□□□□ 0.3
PDE4A-201ENST00000293683 GOLGA8CPA6NN73 597 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 COQ9O75208 318 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 LRATO95237 230 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 SLC25A14O95258 325 aaPredicted RBP16.91■□□□□ 0.3
PDE4A-201ENST00000293683 CELF2O95319 508 aaKnown RBP16.91■□□□□ 0.3
PDE4A-201ENST00000293683 GLUD1P00367 558 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 ZDHHC11BP0C7U3 371 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 PSMB9P28065 219 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 RYKP34925 604 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 DAPP51397 102 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 TOP3AQ13472 1001 aaPredicted RBP16.91■□□□□ 0.3
PDE4A-201ENST00000293683 MAPK11Q15759 364 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 PGS1Q32NB8 556 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 USP39Q53GS9 565 aaKnown RBP16.91■□□□□ 0.3
PDE4A-201ENST00000293683 DSG4Q86SJ6 1040 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 CALHM3Q86XJ0 350 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 ZDHHC21Q8IVQ6 265 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 PLPP6Q8IY26 295 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 PIK3C3Q8NEB9 887 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 FBLIM1Q8WUP2 373 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 TSSK3Q96PN8 268 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 BTBD2Q9BX70 525 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 ACPTQ9BZG2 426 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 CD244Q9BZW8 370 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 PRDM8Q9NQV8 689 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 FCF1Q9Y324 198 aaKnown RBP16.91■□□□□ 0.3
PDE4A-201ENST00000293683 PIKFYVEQ9Y2I7 2098 aa16.91■□□□□ 0.3
PDE4A-201ENST00000293683 ZBBXA8MT70 800 aa16.9■□□□□ 0.3
PDE4A-201ENST00000293683 MYO1GB0I1T2 1018 aa16.9■□□□□ 0.3
PDE4A-201ENST00000293683 M0R3G1 203 aa16.9■□□□□ 0.3
PDE4A-201ENST00000293683 MANBAO00462 879 aa16.9■□□□□ 0.3
PDE4A-201ENST00000293683 GAPDHSO14556 408 aaPredicted RBP16.9■□□□□ 0.3
PDE4A-201ENST00000293683 PER2O15055 1255 aa16.9■□□□□ 0.3
PDE4A-201ENST00000293683 MT-ND2P03891 347 aa16.9■□□□□ 0.3
PDE4A-201ENST00000293683 CCDC159P0C7I6 412 aa16.9■□□□□ 0.3
PDE4A-201ENST00000293683 RPS3AP61247 264 aaKnown RBP16.9■□□□□ 0.3
PDE4A-201ENST00000293683 INAQ16352 499 aa16.9■□□□□ 0.3
PDE4A-201ENST00000293683 ABHD8Q96I13 439 aa16.9■□□□□ 0.3
PDE4A-201ENST00000293683 PYURFQ96I23 114 aa16.9■□□□□ 0.3
PDE4A-201ENST00000293683 FAM126AQ9BYI3 521 aaPredicted RBP16.9■□□□□ 0.3
PDE4A-201ENST00000293683 GPRC5BQ9NZH0 403 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms