RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Acer3Q9D099 267 aa22.16■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Dusp26Q9D700 211 aa22.16■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Mrpl17Q9D8P4 176 aa22.16■■□□□ 1.14
Scn1b-201ENSMUST00000098548 P33monoxQ9DBN4 303 aa22.16■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Trpc4apQ9JLV2 797 aa22.16■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Hey2Q9QUS4 339 aa22.16■■□□□ 1.14
Scn1b-201ENSMUST00000098548 RgrQ9Z2B3 291 aa22.16■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Vmn2r-ps130A0A140T8U3 855 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Znf711A2ANX9 761 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Saxo1B1AXP3 476 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Cbx4O55187 551 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Fv4P11370 679 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Atp1b2P14231 290 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 PgrQ00175 926 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Esrp1Q3US41 680 aaKnown RBP22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Defb48Q3UW22 87 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Bahd1Q497V6 772 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Xlr3aQ60595 226 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Hesx1Q61658 185 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Il1rapQ61730 570 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Six3Q62233 333 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Prpf38bQ80SY5 542 aaKnown RBP22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Q8BWQ6 963 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Peli3Q8BXR6 445 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Stx5Q8K1E0 355 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Ssh3Q8K330 649 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Treml1Q8K558 317 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 NlnQ91YP2 704 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Prpf19Q99KP6 504 aaKnown RBP22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Tcam1Q99NB3 548 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Pop5Q9DB28 169 aa22.15■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Dmrta2A2A9A2 531 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Vmn2r44L7N2E1 861 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Cdh16O88338 830 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 FurinP23188 793 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Pnrc1Q3TWH3 297 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Rbbp7Q60973 425 aaKnown RBP22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Hspa1aQ61696 641 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Smpd4Q6ZPR5 823 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 RragdQ7TT45 449 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Galnt7Q80VA0 657 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Kirrel3Q8BR86 778 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Slc46a2Q8CA03 479 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Creb5Q8K1L0 357 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Ly6g6eQ8K1T6 166 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Adgrl4Q923X1 739 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 AasdhpptQ9CQF6 309 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Vps35Q9EQH3 796 aaKnown RBP22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Nectin1Q9JKF6 515 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Cul3Q9JLV5 768 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Cdh13Q9WTR5 714 aa22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 HnrnpcQ9Z204 313 aaKnown RBP22.14■■□□□ 1.13
Scn1b-201ENSMUST00000098548 B020011L13RikA0A087WQI7 412 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Igkv17-127A0A0G2JDN5 117 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Olfr566A0A1B0GST0 319 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Vmn1r2A2AMT6 306 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Cldn24D3YXJ9 220 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Dgcr6O35347 198 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Surf2P09926 257 aaKnown RBP22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Pdha2P35487 391 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Tstd2Q3U269 495 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Ubtfl1Q3USZ2 394 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Pfdn4Q3UWL8 134 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Map2k2Q63932 401 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Sp9Q64HY3 484 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Olfr594Q7TRR4 311 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Chst8Q8BQ86 417 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Clasp2Q8BRT1 1286 aaKnown RBP22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Med25Q8VCB2 745 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Psip1Q99JF8 528 aaKnown RBP22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Tp73Q9JJP2 631 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Kcne5Q9QZ26 143 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Speer3W4VSP1 261 aa22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Zfc3h1B2RT41 1992 aaKnown RBP22.13■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Gm35911A0A1D5RLS7 214 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Zbtb10E9Q8X5 861 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Vmn2r112L7N221 857 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Fam71e2L7N480 754 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Kcnn4O89109 425 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Ifngr1P15261 477 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Lhx1P63006 406 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 A630001G21RikQ3UTB2 229 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 PdprQ7TSQ8 878 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Tmem184bQ8BG09 407 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Vrk2Q8BN21 503 aaKnown RBP22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Pcdhb21Q91V48 774 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Epb41l4bQ9JMC8 527 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Copg1Q9QZE5 874 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Spry4Q9WTP2 300 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 NcdnQ9Z0E0 729 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Tmem236A2ARJ3 344 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 FanceB8JJD6 213 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Il4i1O09046 630 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 P01665 111 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 P01666 111 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Sox4Q06831 440 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Q3KNL4 93 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Ica1lQ3TY65 431 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Gpr165Q3V3A3 455 aa22.12■■□□□ 1.13
Scn1b-201ENSMUST00000098548 Pnliprp1Q5BKQ4 473 aa22.12■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms