RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Hnf1bP27889 558 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Serpina3cP29621 417 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Fmo5P97872 533 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Aqp1Q02013 269 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Nsun2Q1HFZ0 757 aaKnown RBP9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 MthfsdQ3URQ7 372 aaKnown RBP9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 StradaQ3UUJ4 431 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ppm1hQ3UYC0 513 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Elmod1Q3V1U8 326 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Lcp2Q60787 533 aaKnown RBP9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 A4galtQ67BJ4 359 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Jazf1Q80ZQ5 243 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Slc25a32Q8BMG8 316 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Trmt2bQ8BQJ6 493 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 BC024139Q8BVJ3 772 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Snx16Q8C080 344 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Acad9Q8JZN5 625 aaKnown RBP9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Dcun1d3Q8K0V2 304 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gpat4Q8K2C8 456 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Col23a1Q8K4G2 532 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Zdhhc12Q8VC90 267 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Acsf2Q8VCW8 615 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Psip1Q99JF8 528 aaKnown RBP9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tinagl1Q99JR5 466 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Chmp1b2Q9CQD4 199 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Fam212aQ9CX62 282 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Polr3eQ9CZT4 710 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mgat4cQ9D306 478 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Glod5Q9D8I3 148 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Acox3Q9EPL9 700 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cts8Q9JI81 333 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Grm3Q9QYS2 879 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Orc5Q9WUV0 435 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Plxnb2B2RXS4 1842 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rasgef1aA0A0N4SVR5 498 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Zfp993A2A8V4 313 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm364A2AFI6 671 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Zfp992B1ASD8 573 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 TpteG5E8H5 664 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Grem1O70326 184 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Fth1P09528 182 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cst3P21460 140 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 LipcP27656 510 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Etv4P28322 485 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Hoxc5P32043 222 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 YwhaqP68254 245 aaKnown RBP9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Npr3P70180 536 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tbx6P70327 436 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ttbk2Q3UVR3 1243 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Oog4Q4G0C7 502 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 AbrQ5SSL4 859 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Elavl4Q61701 385 aaKnown RBP9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Itga3Q62470 1053 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tmem17Q8K0U3 198 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Unc5aQ8K1S4 898 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Abhd11Q8K4F5 307 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Zfp991Q8R1N3 573 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 McamQ8R2Y2 648 aaKnown RBP9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Chrna3Q8R4G9 499 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Fam20bQ8VCS3 409 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mtfr2Q8VED8 361 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Exd2Q8VEG4 650 aaKnown RBP9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr183Q8VFB9 309 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Asb15Q8VHS6 583 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Eif3mQ99JX4 374 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ankra2Q99PE2 312 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 1700029P11RikQ9CQ68 150 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 D10Jhu81eQ9D172 266 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cul2Q9D4H8 745 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ccdc81Q9D5W4 654 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 MtfmtQ9D799 386 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Pop7Q9DCH2 140 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 SelenofQ9ERR7 162 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gmeb1Q9JL60 562 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Slc6a14Q9JMA9 638 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Plekhb1Q9QYE9 243 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tmeff2Q9QYM9 374 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Glipr1l3A0A1W2P7V2 236 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Klhdc7bA0A286YD60 1263 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Dmrtb1A2A9I7 359 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mocs3A2BDX3 460 aaKnown RBP9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr1215A3KGY3 312 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mmp27D3YV89 551 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 9630041A04RikD3Z3U4 205 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Vmn2r17E9PYF5 849 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 2010300C02RikE9Q3M9 1175 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Kdelc2G5E897 503 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm10436L7N1Y3 520 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rundc3aO08576 446 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Grcc10O35127 126 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Impa1O55023 277 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 F3P20352 294 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Vps26aP40336 327 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Capza2P47754 286 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Smad1P70340 465 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 TfptQ3U1J1 259 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 McubQ810S1 345 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 DpcdQ8BPA8 203 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Timmdc1Q8BUY5 285 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tmem161bQ8C2L6 487 aa9.55□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms