RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Cngb3Q9JJZ9 694 aa11.79□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Tmub1Q9JMG3 245 aa11.79□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Abhd1Q9QZC8 412 aa11.79□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Lbx2Q9WUN8 195 aa11.79□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 H2-BlV9GXR0 257 aa11.79□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Ascc3E9PZJ8 2198 aaKnown RBP11.79□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Trip12G5E870 2025 aaKnown RBP11.79□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Arfgef3Q3UGY8 2170 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 PoleQ9WVF7 2283 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Pgm2A2CEK3 580 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Apol8A2VDH7 339 aaKnown RBP11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Chst13D3Z6E3 336 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 B3galt1O54904 326 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Btnl2O70355 454 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Il2rgP34902 369 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Hspa9P38647 679 aaKnown RBP11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Ppp1caP62137 330 aaKnown RBP11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Serpinb5P70124 375 aaKnown RBP11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Frat1P70339 274 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Ldb1P70662 411 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Treml4Q3LRV9 263 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Mex3dQ3UE17 643 aaKnown RBP11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Q3UTZ3 580 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Mthfd1lQ3V3R1 977 aaKnown RBP11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Tapt1Q4VBD2 564 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 JrkQ60976 557 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 CybaQ61462 192 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Sh3rf1Q69ZI1 892 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Zdhhc24Q6IR37 284 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Zfp759Q7M6X3 721 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Sdr16c5Q7TQA3 309 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Olfr1134Q7TR43 312 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Trim69Q80X56 500 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Cdc23Q8BGZ4 597 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Clec4gQ8BNX1 294 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Elmo1Q8BPU7 727 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Fjx1Q8BQB4 450 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Cfap20Q8BTU1 193 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Pdik1lQ8QZR7 341 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 ItpkaQ8R071 459 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Cyyr1Q8VIH7 165 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Serbp1Q9CY58 407 aaKnown RBP11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Mxra7Q9CZH7 178 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Sohlh2Q9D489 467 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Pnp2Q9D8C9 305 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 FancgQ9EQR6 623 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Smad9Q9JIW5 430 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 EcsitQ9QZH6 435 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 NsdhlQ9R1J0 362 aa11.78□□□□□ -0.52
Ccdc28a-202ENSMUST00000080860 Osbpl9A2A8Z1 736 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Syndig1A2ANU3 258 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Mmrn1B2RPV6 1210 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Mroh5E9PUJ8 762 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gm19345G3UYD9 124 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gm7995L7N2E4 160 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Zfpm1O35615 995 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 LumP51885 338 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gal3st3P61315 431 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gabrb3P63080 473 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Anp32eP97822 260 aaKnown RBP11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 F8a1Q00558 380 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Pfdn6Q03958 127 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Krt26Q3TRJ4 462 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ica1lQ3TY65 431 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Lrrc58Q3UGP9 366 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Rnf44Q3UHJ8 407 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Dtx3lQ3UIR3 748 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Fam91a1Q3UVG3 837 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Q6GQU0 248 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tbc1d31Q6NXY1 996 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ranbp10Q6VN19 620 aaKnown RBP11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Svs1Q6WIZ7 820 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Foxo6Q70KY4 559 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Kirrel2Q7TSU7 700 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 PeloQ80X73 385 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Prickle2Q80Y24 845 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 NfascQ810U3 1240 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gpr152Q8BXS7 511 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Fbxl8Q8CIG9 374 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Dcun1d3Q8K0V2 304 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Agpat4Q8K4X7 378 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Eif3hQ91WK2 352 aaKnown RBP11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Mrgpra2Q91WW4 305 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Creld1Q91XD7 420 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Lactb2Q99KR3 288 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 4933425L06RikQ9D3Z8 585 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Slc52a3Q9D6X5 460 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tmigd1Q9D7L8 261 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 PrepQ9QUR6 710 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Irx4Q9QY61 515 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Klrc2Q9WTJ9 238 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Fkbp9Q9Z247 570 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Fem1aaQ9Z2G1 654 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Vps13cQ8BX70 3748 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Sptbn2Q68FG2 2388 aa11.77□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tmem45a2B7ZWJ5 289 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Mtx3D3YTP3 312 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gm29394H3BIW7 199 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Vmn1r170K7N6W9 304 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Top3aO70157 1003 aa11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms