RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Dcun1d2Q8BZJ7 259 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 BtdQ8CIF4 520 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Dnm1lQ8K1M6 742 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Sgsm3Q8VCZ6 750 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tas1r2Q925I4 843 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 GsdmcQ99NB5 468 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Q9CWU4 180 aaKnown RBP6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Chit1Q9D7Q1 464 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gsdmdc1Q9D8T2 487 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fads3Q9JJE7 449 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 TrehQ9JLT2 576 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Mup6A2AV72 179 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 FanceB8JJD6 213 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Serpine3E9Q6A2 401 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Vmn2r4K7N784 913 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Srp54P14576 504 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Id2P41136 134 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tbc1d10aP58802 500 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Psmb4P99026 264 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Kcnd1Q03719 651 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Serpina3mQ03734 418 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 RelaQ04207 549 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Kcnh6Q32ME0 950 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 LchnQ3UHG7 455 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Lrrc8bQ5DU41 803 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Prkaa1Q5EG47 559 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fzd4Q61088 537 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 HadhQ61425 314 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Mc2rQ64326 296 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ca4Q64444 305 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Brsk2Q69Z98 735 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Dupd1Q8BK84 215 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Klf8Q8BLM0 355 aaKnown RBP6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Lrfn3Q8BLY3 626 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Palm2Q8BR92 376 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ugt2b34Q8K154 532 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Glcci1Q8K3I9 537 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Irak3Q8K4B2 609 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tmco1Q921L3 188 aaKnown RBP6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Prdm9Q96EQ9 843 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 NtpcrQ9CQA9 190 aaKnown RBP6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Bud23Q9CY21 281 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tmem80Q9D3H0 123 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gmeb1Q9JL60 562 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 PnckQ9QYK9 343 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tubd1Q9R1K7 455 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ptpn4Q9WU22 926 aa6.76□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Col5a3Q9JLI2 1739 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Znf536Q8K083 1302 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Shroom3Q9QXN0 1986 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Trbv4A0A075B5I2 113 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 D3Ertd254eA0A0G2JEM5 796 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Vmn2r76E9Q3F5 853 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Slc4a5E9Q3M5 1116 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Kcng2F7A6P6 480 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Olfm1O88998 485 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Prl3b1P09586 222 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Nedd8P29595 81 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Grik2P39087 908 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 StacP97306 403 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Osgin2Q3TEE9 550 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Uap1l1Q3TW96 507 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Naa11Q3UX61 218 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Slc22a16Q497L8 649 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Psg28Q4KL66 472 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Sdc3Q64519 442 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Doc2aQ7TNF0 405 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Olfr309Q7TS01 308 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Znf423Q80TS5 1292 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tubgcp5Q8BKN5 1024 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fam180aQ8BR21 173 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 C1qtnf7Q8BVD7 289 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gucd1Q8BZI6 239 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Crispld1Q8CGD2 500 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 LctlQ8K1F9 566 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Olfr315Q8VFG7 309 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Depdc7Q91WS7 511 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Crtc3Q91X84 619 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tnfaip8l2Q9D8Y7 184 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rad1Q9QWZ1 280 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 UxtQ9WTZ0 157 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Col4a6B1AVK5 1691 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ankle1A8VU90 534 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Nipsnap3aB1AWZ3 247 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Slc9a5B2RXE2 898 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ifit3bE9PV48 403 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rgs4O08899 205 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 AgxtO35423 414 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Dnajb5O89114 348 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Hoxa9P09631 271 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ly6fP35460 134 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 NficP70255 439 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Sap25Q1EHW4 186 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 NfkbidQ2TB02 327 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ccdc69Q3TCJ8 202 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Pik3r3Q64143 461 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Maml1Q6T264 1020 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 ScocQ78YZ6 125 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Zfp759Q7M6X3 721 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Lrrtm4Q80XG9 590 aa6.75□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms