RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Bhlhe41Q99PV5 410 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Dsn1Q9CYC5 348 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Otud4B2RRE7 1107 aaKnown RBP13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Dbx2F8VQH7 377 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Fabp1P12710 127 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 ClpbQ60649 677 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tchhl1Q9D3P1 638 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Hmgn3Q9DCB1 99 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Prl2c2P04095 224 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 McidasQ3UZ45 379 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Clcn4Q61418 747 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Slc9a9Q8BZ00 644 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tmem161bQ8C2L6 487 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Sox30Q8CGW4 782 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Trps1Q925H1 1281 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Dcp2Q9CYC6 422 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tfr2Q9JKX3 798 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Robo1O89026 1612 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Papss1Q60967 624 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Foxd1Q61345 456 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Adam20Q7M763 760 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gin1Q8K259 518 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 HephQ9Z0Z4 1157 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 PotegA5H0M4 473 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Armc4B2RY50 1037 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm3149E9PW52 257 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm8362K7N6Y6 257 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 LynP25911 512 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cxcr5Q04683 374 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Olfm2Q8BM13 448 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tmem220Q8BP07 167 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Il33Q8BVZ5 266 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Eipr1Q8K0G5 386 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Lrrc34Q9DAM1 415 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Med20Q9R0X0 212 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 DnpepQ9Z2W0 473 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Fam151bD3YUE4 279 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm21915J3QPM7 133 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 E2f3O35261 457 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Prkag1O54950 330 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ano7Q14AT5 859 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Sema3gQ4LFA9 780 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Lrrc4cQ8C031 640 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Trub1Q8C0D0 338 aaKnown RBP13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Lrrc20Q8CI70 184 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 ItpkaQ8R071 459 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 NtsQ9D3P9 169 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Vmn2r14E9Q759 848 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ptar1E9QAB6 424 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gtf2bP62915 316 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 BB287469Q3UT53 144 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Spin1Q61142 262 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 EdnraQ61614 427 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Slc43a1Q8BSM7 564 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Pla2g12bQ99P27 195 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ric1Q69ZJ7 1422 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 PenkP22005 268 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Med26Q7TN02 588 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cndp1Q8BUG2 492 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 KmoQ91WN4 479 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Noa1Q9JJG9 693 aaKnown RBP13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Sult1b1Q9QWG7 299 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Scgb2b17S4R2V3 82 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Clec3bP43025 202 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gprc5aQ8BHL4 356 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Q8R2K8 148 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Asb17Q8VHP9 295 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Uck2Q99PM9 261 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Slc7a8Q9QXW9 531 aa13.73□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Vmn2r34E9PVI0 852 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Vmn2r41E9Q5C7 852 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Vmn2r40F6W043 852 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Vmn2r37F8VQD3 802 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Vmn2r36K7N741 852 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 TrhrP21761 393 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 GaaP70699 953 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 AxlQ00993 888 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Col6a2Q02788 1034 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Zfp953Q3UPV7 304 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Kif18bQ6PFD6 834 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Med31Q9CXU1 131 aaKnown RBP13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 4930524N10RikQ9D519 233 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 B3galt2O54905 422 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tgfb2P27090 414 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Igfbp1P47876 272 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Kcnc2Q14B80 642 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cdh12Q5RJH3 794 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cand1Q6ZQ38 1230 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Oog2Q7TPX8 476 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Lsm1Q8VC85 133 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Esp15A8R0U8 85 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Zfp990B1AVN5 605 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 9630041A04RikD3Z3U4 205 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm21833J3QPK1 500 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Psme2P97372 239 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Yes1Q04736 541 aaKnown RBP13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 AccslQ3UX83 580 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm11437Q5QR91 290 aa13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Eif5a2Q8BGY2 153 aaKnown RBP13.72□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ugt2b1Q8R084 529 aa13.72□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms