RNA–Protein interactions for RNA: ENST00000593283.5

CIRBP-244, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-244ENST00000593283 KCNAB2Q13303 367 aa17.15■□□□□ 0.34
CIRBP-244ENST00000593283 TMED2Q15363 201 aa17.15■□□□□ 0.34
CIRBP-244ENST00000593283 CRTC2Q53ET0 693 aaPredicted RBP17.15■□□□□ 0.34
CIRBP-244ENST00000593283 DNAJC21Q5F1R6 531 aaKnown RBP17.15■□□□□ 0.34
CIRBP-244ENST00000593283 PRAMEF17Q5VTA0 474 aa17.15■□□□□ 0.34
CIRBP-244ENST00000593283 PTRHD1Q6GMV3 140 aaKnown RBP17.15■□□□□ 0.34
CIRBP-244ENST00000593283 SLC35F6Q8N357 371 aa17.15■□□□□ 0.34
CIRBP-244ENST00000593283 COG1Q8WTW3 980 aa17.15■□□□□ 0.34
CIRBP-244ENST00000593283 TRAPPC9Q96Q05 1148 aa17.15■□□□□ 0.34
CIRBP-244ENST00000593283 CARD6Q9BX69 1037 aa17.15■□□□□ 0.34
CIRBP-244ENST00000593283 P2RY12Q9H244 342 aa17.15■□□□□ 0.34
CIRBP-244ENST00000593283 KCNF1Q9H3M0 494 aa17.15■□□□□ 0.34
CIRBP-244ENST00000593283 AKIRIN1Q9H9L7 192 aaPredicted RBP17.15■□□□□ 0.34
CIRBP-244ENST00000593283 SPHK1Q9NYA1 384 aa17.15■□□□□ 0.34
CIRBP-244ENST00000593283 POLG2Q9UHN1 485 aa17.15■□□□□ 0.34
CIRBP-244ENST00000593283 GNPTGQ9UJJ9 305 aa17.15■□□□□ 0.34
CIRBP-244ENST00000593283 KCND3Q9UK17 655 aa17.15■□□□□ 0.34
CIRBP-244ENST00000593283 PCDHGA6Q9Y5G7 932 aa17.15■□□□□ 0.34
CIRBP-244ENST00000593283 C21orf140B9A014 251 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 AVILO75366 819 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 GPC4O75487 556 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 NDUFS3O75489 264 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 VAPBO95292 243 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 APOA4P06727 396 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 SFTPCP11686 197 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 AOAHP28039 575 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 PKLRP30613 574 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 EIF3BP55884 814 aaKnown RBP17.14■□□□□ 0.33
CIRBP-244ENST00000593283 CYP1B1Q16678 543 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 FAM199XQ6PEV8 388 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-244ENST00000593283 PRICKLE2Q7Z3G6 844 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 C19orf47Q8N9M1 422 aaKnown RBP17.14■□□□□ 0.33
CIRBP-244ENST00000593283 OR1L3Q8NH93 324 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 ASZ1Q8WWH4 475 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 CPT1BQ92523 772 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 OR2A14Q96R47 310 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 ACTL8Q9H568 366 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 OR6C2Q9NZP2 312 aa17.14■□□□□ 0.33
CIRBP-244ENST00000593283 CDC14CA4D256 554 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 GOLGA8KD6RF30 607 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 GOLGA8TH3BQL2 631 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 SLC28A2O43868 658 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 FURINP09958 794 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 MSL3P1P0C860 447 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 CYP2A7P20853 494 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 RPS3P23396 243 aaKnown RBP eCLIP17.13■□□□□ 0.33
CIRBP-244ENST00000593283 COILP38432 576 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-244ENST00000593283 RPS18P62269 152 aaKnown RBP17.13■□□□□ 0.33
CIRBP-244ENST00000593283 ERV3-1Q14264 604 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 ZNF789Q5FWF6 425 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 KIAA0930Q6ICG6 404 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-244ENST00000593283 CDHR3Q6ZTQ4 885 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 TMEM135Q86UB9 458 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 CAND1Q86VP6 1230 aaKnown RBP17.13■□□□□ 0.33
CIRBP-244ENST00000593283 HOOK3Q86VS8 718 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 DCUN1D3Q8IWE4 304 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 SLC38A9Q8NBW4 561 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 CFAP61Q8NHU2 1237 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 FLVCR1-AS1Q8TAF5 88 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 MR1Q95460 341 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 OSBPL9Q96SU4 736 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 NAP1L3Q99457 506 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-244ENST00000593283 TRIM56Q9BRZ2 755 aaKnown RBP17.13■□□□□ 0.33
CIRBP-244ENST00000593283 FAM117AQ9C073 453 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 SLC25A18Q9H1K4 315 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 CIDEBQ9UHD4 219 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 PCDHB3Q9Y5E6 796 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 HEMK1Q9Y5R4 338 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-244ENST00000593283 MED13Q9UHV7 2174 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 CCDC88CQ9P219 2028 aa17.13■□□□□ 0.33
CIRBP-244ENST00000593283 MAP3K7O43318 606 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 KDM1AO60341 852 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 CREG1O75629 220 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 SLCO2B1O94956 709 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 PEBP1P30086 187 aaKnown RBP17.12■□□□□ 0.33
CIRBP-244ENST00000593283 SARNPP82979 210 aaKnown RBP17.12■□□□□ 0.33
CIRBP-244ENST00000593283 ZIC1Q15915 447 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 TYSND1Q2T9J0 566 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 DEFB110Q30KQ9 67 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 CTSL3PQ5NE16 218 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 MRNIPQ6NTE8 343 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 CASC4Q6P4E1 433 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 CCDC137Q6PK04 289 aaKnown RBP17.12■□□□□ 0.33
CIRBP-244ENST00000593283 UNC5DQ6UXZ4 953 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 LRRC6Q86X45 466 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 APOBEC4Q8WW27 367 aaKnown RBP17.12■□□□□ 0.33
CIRBP-244ENST00000593283 LPGAT1Q92604 370 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 PANX3Q96QZ0 392 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 TWSG1Q9GZX9 223 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 SYTL2Q9HCH5 934 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 TRMT1Q9NXH9 659 aaKnown RBP17.12■□□□□ 0.33
CIRBP-244ENST00000593283 SAMD15Q9P1V8 674 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 TUBD1Q9UJT1 453 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 NEU2Q9Y3R4 380 aa17.12■□□□□ 0.33
CIRBP-244ENST00000593283 A0A0J9YY10 115 aa17.11■□□□□ 0.33
CIRBP-244ENST00000593283 GOLGA8MH3BSY2 632 aa17.11■□□□□ 0.33
CIRBP-244ENST00000593283 PYCARD-AS1I3L0S3 204 aa17.11■□□□□ 0.33
CIRBP-244ENST00000593283 J3QKU1 62 aa17.11■□□□□ 0.33
CIRBP-244ENST00000593283 ZSCAN12O43309 604 aa17.11■□□□□ 0.33
CIRBP-244ENST00000593283 PHF2O75151 1096 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms