RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 GEMIN8Q9NWZ8 242 aaKnown RBP12□□□□□ -0.49
SS18-225ENST00000585121 MARCH4Q9P2E8 410 aaPredicted RBP12□□□□□ -0.49
SS18-225ENST00000585121 ICKQ9UPZ9 632 aa12□□□□□ -0.49
SS18-225ENST00000585121 MRFAP1Q9Y605 127 aa12□□□□□ -0.49
SS18-225ENST00000585121 CFAP46Q8IYW2 2715 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 BAHCC1Q9P281 2608 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 COL6A6A6NMZ7 2263 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 ZNF462Q96JM2 2506 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 TCRBV7S3A2A0A539 114 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 IQCF5A8MTL0 148 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 B8ZZF3 427 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 H3BMM5 538 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 MLNP12872 115 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 MAGEA6P43360 314 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 RPS15P62841 145 aaKnown RBP11.99□□□□□ -0.49
SS18-225ENST00000585121 ABRQ12979 859 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 DNASE1L3Q13609 305 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 DEFB109BQ30KR1 87 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 TTC27Q6P3X3 843 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 CES3Q6UWW8 571 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 OTOAQ7RTW8 1153 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 ACTRT1Q8TDG2 376 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 CT55Q8WUE5 264 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 SKA2Q8WVK7 121 aaPredicted RBP11.99□□□□□ -0.49
SS18-225ENST00000585121 APOBEC4Q8WW27 367 aaKnown RBP11.99□□□□□ -0.49
SS18-225ENST00000585121 SEC14L1Q92503 715 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 CPT1BQ92523 772 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 FOPNLQ96NB1 174 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 TRAPPC9Q96Q05 1148 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 OSBPL9Q96SU4 736 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 TCF12Q99081 682 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 GPR87Q9BY21 358 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 PITPNM3Q9BZ71 974 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 XAB2Q9HCS7 855 aaKnown RBP11.99□□□□□ -0.49
SS18-225ENST00000585121 TRMT1Q9NXH9 659 aaKnown RBP11.99□□□□□ -0.49
SS18-225ENST00000585121 VPS9D1Q9Y2B5 631 aa11.99□□□□□ -0.49
SS18-225ENST00000585121 SDR42E2A6NKP2 422 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 ISM1B1AKI9 464 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 TMEM150CB9EJG8 249 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 CES2O00748 559 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 PHF2O75151 1096 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 GPC4O75487 556 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 TIAF1O95411 115 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 CHRM5P08912 532 aaPredicted RBP11.98□□□□□ -0.49
SS18-225ENST00000585121 MSL3P1P0C860 447 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 ST6GAL1P15907 406 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 RPS3P23396 243 aaKnown RBP eCLIP11.98□□□□□ -0.49
SS18-225ENST00000585121 F8A1P23610 371 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 AOAHP28039 575 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 FNTAP49354 379 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 EIF3BP55884 814 aaKnown RBP11.98□□□□□ -0.49
SS18-225ENST00000585121 POLE2P56282 527 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 NFATC3Q12968 1075 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 KIR2DS3Q14952 304 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 CYP1B1Q16678 543 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 KIAA0930Q6ICG6 404 aaPredicted RBP11.98□□□□□ -0.49
SS18-225ENST00000585121 UNC5DQ6UXZ4 953 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 GPR135Q8IZ08 494 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 KRT222Q8N1A0 295 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 RAB42Q8N4Z0 105 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 MCUQ8NE86 351 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 MR1Q95460 341 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 CLIP3Q96DZ5 547 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 MFSD3Q96ES6 412 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 TCTN2Q96GX1 697 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 TWSG1Q9GZX9 223 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 TUBD1Q9UJT1 453 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 SLC39A10Q9ULF5 831 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 PCDHGA6Q9Y5G7 932 aa11.98□□□□□ -0.49
SS18-225ENST00000585121 MRPS18BQ9Y676 258 aaKnown RBP11.98□□□□□ -0.49
SS18-225ENST00000585121 A0A0J9YY10 115 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 E7EQ34 232 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 ZNF500O60304 480 aaPredicted RBP11.97□□□□□ -0.49
SS18-225ENST00000585121 AVILO75366 819 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 SLCO2B1O94956 709 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 RECKO95980 971 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 HBQ1P09105 142 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 UGT2B7P16662 529 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 OAS2P29728 719 aaKnown RBP11.97□□□□□ -0.49
SS18-225ENST00000585121 FMO4P31512 558 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 RAB28P51157 221 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 ITGA1P56199 1179 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 KCNAB2Q13303 367 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 THOC5Q13769 683 aaKnown RBP11.97□□□□□ -0.49
SS18-225ENST00000585121 ERV3-1Q14264 604 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 PPP1R7Q15435 360 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 PLEKHS1Q5SXH7 462 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 DCUN1D3Q8IWE4 304 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 C19orf47Q8N9M1 422 aaKnown RBP11.97□□□□□ -0.49
SS18-225ENST00000585121 LKAAEAR1Q8TD35 194 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 COG1Q8WTW3 980 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 SLC22A18Q96BI1 424 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 NRTNQ99748 197 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 KLHL25Q9H0H3 589 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 SLC25A18Q9H1K4 315 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 P2RY12Q9H244 342 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 ACTR5Q9H9F9 607 aaPredicted RBP11.97□□□□□ -0.49
SS18-225ENST00000585121 PLAGL1Q9UM63 463 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 SNX12Q9UMY4 172 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 POLHQ9Y253 713 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms